GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:50:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC10m24_087, unspecified EST.
FY457761.1:285-304
CTGAGCATTCAACTTTCTTCACTGATGATC285GTCGATGCCGGATTATCATCCTACGATAAACTTCCTTCTCAAACTCTCAC
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:43012927-43012946
CTGAGCATTCAACTTTCTTCATTGATGATC43012927GTCGATGCCGGATTATCATCCTACGACAAACTTCCTTCCCACACTCTCAC
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:52988286-52988305
GTGAGAGTTTGAGAAGGAAGTTTATCGTAG52988286GATGATAATCCGGCATCGACGATCATCAGTGAAGAAAGTTGAATGCTCAG
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:55623671-55623690
GTGAGAGTGTGGGAAGGAAGTTTATCGTAG55623671GATGATAATCCGGCATCGACGATCATCAGTGAAGAAAGTTGAATGCTCAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTCGATGCCGGATTATCATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCGATGCCGGATTATCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=GTCGATGCCGGATTATCATC&k=0&no_gap=0&offset=0&limit=50
0.190 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GATGATAATCCGGCATCGAC&k=0&no_gap=0&offset=0&limit=48
0.192 | 0.001 | cgi_end;

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