GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 23:11:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Meleagris gallopavo genome assembly, chromosome: 2.
OW982253.1:104709385-104709404
AATTGCTAGAACATCCCAGTGTCCTGCTGG104709385GTGAGATCAGAAAGTCACCGAGCTGCAGTACTTACTCTTCAGGTTTACTC
Meleagris gallopavo genome assembly, chromosome: 2.
OW982292.1:104783278-104783297
AATTGCTAGAACATCCCAGTGTCCTGCTGG104783278GTGAGATCAGAAAGTCACCGAGCTGCAGTACTTACTCTTCAGGTTTACTC
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:33395632-33395651
AAGGTATTAAGCTTGCTTATCGTATACTCT33395632GTGAGATCAGAAAGTCACCGCCGGGATGGTACTTCTGACCATATACCGCT
Ocypus olens genome assembly, chromosome: 3.
OU343049.1:62020700-62020719
TGCAAGTTCTTCAGTGCTGATGACAGTACA62020700GTGAGATCAGAAAGTCACCGGAAGTAAGAAATGATAATAGTTATAGTAAA
Brassica rapa genome, scaffold: A07.
LR031574.1:3159638-3159657
AGCGGTATATGGTCAGAAGTACCATCCCGG3159638CGGTGACTTTCTGATCTCACAGAGTATACGATAAGCAAGCTTAATACCTT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:3202136-3202155
AGCGGTATATGGTCAGAAGTACCATCCCGG3202136CGGTGACTTTCTGATCTCACAGAGTATACGATAAGCAAGCTTAATACCTT
Thymelicus acteon genome assembly, chromosome: 14.
OX638226.1:8948475-8948494
TAAAGTTAAACCAATACAATGCGCCTATCA8948475CGGTGACTTTCTGATCTCACTGAATAAAATCTGTGTAGATTCAGTGTGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGAGATCAGAAAGTCACCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGAGATCAGAAAGTCACCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=GTGAGATCAGAAAGTCACCG&k=0&no_gap=0&offset=0&limit=50
0.144 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=CGGTGACTTTCTGATCTCAC&k=0&no_gap=0&offset=0&limit=46
0.146 | 0.002 | cgi_end;

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