GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:31:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

rhnycca0_0004_B07 Three development stage Cocos nucifera endosperm by Suppression subtractive hybridization (SSH) method Cocos nucifera cDNA, mRNA sequence.
JZ534040.1:150-169
CGAGAAGAGGGAGGACGTACTTGAGCAACT150GTGGCCGCTTCTTCTTGTAGGTTGGGGTAAGCAGATCACGTCCCATGTCA
Elaeis guineensis EST, clone (6lib)_isotig17751.
LM617564.1:33-52
TAATAACCATCTGGTAGTACTTGAGCAACT33GTGGCCGCTTCTTCTTGTAGGTTGGGGTAAGCAGATCACGTTCCATGTCA
TSA: Elaeis guineensis isotig11658.Elguifruit mRNA sequence.
JO098885.1:192-211
TAATAACCATCTGGTAGTACTTGAGCAACT192GTGGCCGCTTCTTCTTGTAGGTTGGGGTAAGCAGATCACGTTCCATGTCA
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 4.
CP125976.1:54794168-54794187
CCGCCTGCCTACTTCCTCGCTGACCCTGTT54794168GTGGCCGCTTCTTCTTGTAGGCCGCACCTGAACACGGGAAGGACACTGCG
pOP-CNIP00019_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00019 5', mRNA sequence.
EY404552.1:374-393
TGACATGGAACGTGATCTGCTTACCCCAAC374CTACAAGAAGAAGCGGCCACAGTTGCTCAAGTACTACCAGATGGTTATTA
Darwinula stevensoni.
LR903804.1:21240-21259
CCCGACCAAACATGCGATTCCGATGCCGAC21240CTACAAGAAGAAGCGGCCACGGACCAGGAGCCCCCAAAGCAGATCAACCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGGCCGCTTCTTCTTGTAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGGCCGCTTCTTCTTGTAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.282 | 0.273 | search_plus_done; http://172.18.8.135:50400/match?q=GTGGCCGCTTCTTCTTGTAG&k=0&no_gap=0&offset=0&limit=50
0.370 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=CTACAAGAAGAAGCGGCCAC&k=0&no_gap=0&offset=0&limit=46
0.372 | 0.002 | cgi_end;

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