GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:24:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Fusarium oxysporum f. sp. koae isolate 44 chromosome LSX.
CP052908.1:1775368-1775388
GAAGTGCTTGACTAAGAACGCAGCCGTGGA1775368GTTCAACAAGGACTGCATCACGGCGATAGAGCAATCTGCAGACGAAGTTGG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:28953397-28953417
CACAAACCAAATCACAGCTTATCATAATAA28953397GTTCAACAAGGACTGCATCACGGTTTATCATAATGTTATTTGCACTATATA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:27164089-27164109
TATATAGTGCAAATAACATTATGATAAACC27164089GTGATGCAGTCCTTGTTGAACTTATTATGATAAGCTGTGATTTGGTTTGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTCAACAAGGACTGCATCAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTCAACAAGGACTGCATCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=GTTCAACAAGGACTGCATCAC&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=GTGATGCAGTCCTTGTTGAAC&k=0&no_gap=0&offset=0&limit=48
0.111 | 0.001 | cgi_end;

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