GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:34:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392550.1:4519907-4519927
ATTAGCCTTGCTTGAATTGCCTCTGGAAAG4519907GTTCGTTTGCTTTACTTTGTGGTGTAATGCTATTTTAATCTTCTGTAACTT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392559.1:4521190-4521210
ATTAGCCTTGCTTGAATTGCCTCTGGAAAG4521190GTTCGTTTGCTTTACTTTGTGGTGTAATGCTATTTTAATCTTCTGTAACTT
Apotomis turbidana genome assembly, chromosome: 1.
LR990281.1:17611173-17611193
TATGCTCATGTTTAATACATAGAAACTGTT17611173GTTCGTTTGCTTTACTTTGTGTGCACTGGCAACACTGTTGATGTATTTGGT
Apotomis betuletana genome assembly, chromosome: 1.
OW026299.1:23598346-23598366
ACCACATGCGTCAACAGTGTTGCCAGTGCA23598346CACAAAGTAAAGCAAACGAACAACAGTTTCTATGTATTAAACATGAGCATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTCGTTTGCTTTACTTTGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTCGTTTGCTTTACTTTGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=GTTCGTTTGCTTTACTTTGTG&k=0&no_gap=0&offset=0&limit=50
0.118 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=CACAAAGTAAAGCAAACGAAC&k=0&no_gap=0&offset=0&limit=47
0.118 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).