GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 12:25:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 4, clone: LjT05D12, TM0303.
AP006417.1:74701-74720
GGCGGCGACGATGGCGAGGCCGATCTTGCC74701GTTGGAAACGCTGCCTTCTCCGGTGATGGAGGACATGAAGGAGGAGTTGG
Lotus japonicus mRNA, clone: MR041h03_r, 5' end sequence.
DC599261.1:530-549
CCAACTCCTCCTTCATGTCCTCCATCACCG530GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGC
Lotus japonicus cDNA, clone: LjFL3-018-AC05, 5'-end sequence.
FS324099.1:548-567
CCAACTCCTCCTTCATGTCCTCCATCACCG548GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus cDNA, clone: LjFL1-029-BD10, HTC.
AK336837.1:533-552
CCAACTCCTCCTTCATGTCCTCCATCACCG533GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus genomic DNA, chromosome 4, clone: LjT37C07, TM0664.
AP007499.2:118618-118637
CCAACTCCTCCTTCATGTCCTCCATCACCG118618GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:68368305-68368324
CCAACTCCTCCTTCATGTCCTCCATCACCG68368305GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTGGAAACGCTGCCTTCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTGGAAACGCTGCCTTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGGAAACGCTGCCTTCTC&k=0&no_gap=0&offset=0&limit=50
0.290 | 0.192 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAAGGCAGCGTTTCCAAC&k=0&no_gap=0&offset=0&limit=49
0.294 | 0.004 | cgi_end;

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