GGGenome | Results

Help | Japanese

2025-04-14 09:10:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Solanum melongena mRNA, clone: SmFL12P14, 5'end.
FS074898.1:155-174

TCGTCCTCGTCCTCGTCGCTTCTCCTTTCC155ACGATGGAAAGGTGCAAAACCAATCCCACTATTGATATCCATATCAATAG

Solanum dulcamara genome assembly, chromosome: 1.
OX359252.1:3789550-3789569

TCCTTCTCGTCGTCGTCATCTCTCACTTGC3789550ACGATGGAAAGGTGCAAAACCAATCCCACTAGTCGTATCCATAACAATAG

Leptopterna dolabrata genome assembly, chromosome: 5.
OX940979.1:15803982-15804001

GCTGAATTTAGTTAACACGTGAGATTAGGT15803982ACGATGGAAAGGTGCAAAACGGCGAAACTCAGTGGTTTTCTGGCATCTCG

Tipula lateralis genome assembly, chromosome: 1.
OZ010736.1:122858548-122858567

GCGCTGGTGTTTGCTATTGAATCATTACAA122858548ACGATGGAAAGGTGCAAAACCTATATCCTATTTTTTATCTGCCTATTCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.103 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=GTTTTGCACCTTTCCATCGT&k=0&no_gap=0&offset=0&limit=50
0.202 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=ACGATGGAAAGGTGCAAAAC&k=0&no_gap=0&offset=0&limit=50
0.205 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).