GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:37:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nannobrachium achirus genome assembly, chromosome: 18.
OY997655.1:40876609-40876628
GATTAATCTTCATTGATCCTCCATTAAAGA40876609TAAAACCAAATCGGAAACGCCATAATACAGACACACACACATGCACATGC
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:12281787-12281806
CAAGAACGCCTATCTATTCGAGAGGAACCC12281787TAAAACCAAATCGGAAACGCAGAACGGTGGGCTCTAGCCAAGCAAGGGAA
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:12298713-12298732
CAAGAACGCCTATCTATTCGAGAGGAACCC12298713TAAAACCAAATCGGAAACGCAGAACGGTGGGCTCTAGCCAAGCAAGGGGA
Trichormus variabilis NIES-23 DNA, nearly complete genome.
AP018216.1:3102703-3102722
CGGCCAATCTTCTAGTAATCCCTCTTCATC3102703TAAAACCAAATCGGAAACGCCTTGGAAATAGGAATCGATAGTTTGTTGCT
Nostoc sp. PCC 7120 DNA, complete genome.
BA000019.2:4996271-4996290
CGGCCAATCTTCTAGTAATCCCTCTTCATC4996271TAAAACCAAATCGGAAACGCCTTGGAAATAGGAATCGATAGTTTGTTGCT
Gari tellinella genome assembly, chromosome: 6.
OV277861.1:2345914-2345933
ATTTTGTCGGCTATATTGCTTGCCCATATC2345914TAAAACCAAATCGGAAACGCTTTTTGCGATGACGTAAGAAGGTCGCACGC
Rhingia campestris genome assembly, chromosome: 1.
OW052182.1:68443377-68443396
AAAATATTTGCGTGCCTTAAACATTTAAAT68443377TAAAACCAAATCGGAAACGCATTTATACTTACGGCTTCTTCCATTTTATT
RE29484.5prime RE Drosophila melanogaster normalized Embryo pFlc-1 Drosophila melanogaster cDNA clone RE29484 5 similar to CG13610: FBan0013610 'transporter' located on: 3R 95F2-95F2;: 04/12/2001, mRN
BI233195.1:281-300
GACATCACGAGATTGTGCCAAAAAAGCATA281GCGTTTCCGATTTGGTTTTATTATACCGGCGCCACTCGACGAAGTCAGTT
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:30778900-30778919
TCCCCTTTCTTGGCTAGTGCCCACCGTTCT30778900GCGTTTCCGATTTGGTTTTAGGGTTCCTTTCGAATAGATAGACGTTCTTG
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:34487764-34487783
TCCCCTTTCTTGGCTAGTGCCCACCGTTCT34487764GCGTTTCCGATTTGGTTTTAGGGTTCCTTTCGAATAGATAGACGTTCTTG
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:31469435-31469454
TCCCCTTTCTTGGCTAGTGCCCACCGTTCT31469435GCGTTTCCGATTTGGTTTTAGGGTTCCTTTCGAATAGATAGACGTTCTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAAAACCAAATCGGAAACGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAAACCAAATCGGAAACGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.156 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=TAAAACCAAATCGGAAACGC&k=0&no_gap=0&offset=0&limit=50
0.198 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTTTCCGATTTGGTTTTA&k=0&no_gap=0&offset=0&limit=43
0.201 | 0.003 | cgi_end;

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