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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:36:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Caprimulgus europaeus genome assembly, chromosome: 4.
OU015526.1:62401049-62401068
ATCTCTATTTGTCGAGAGAGAGAGTTTTCT62401049TAAAACTTGTCTGCAAAATGAGGTGCAGGTGATTGCATGCTAACTCAGTT
Gymnoscopelus microlampas genome assembly, chromosome: 10.
OY732712.1:29383322-29383341
TTAAAGCAATAGCAGTAGCTAGGCCTATAC29383322TAAAACTTGTCTGCAAAATGTGTGAAAGCTCAATTATTTGACCAGGGGCC
Sus scrofa genomic clone PigE-9I7, genomic survey sequence.
CT260494.1:460-479
GATAGCCCATGAAACAAGCAGATGCTTCCT460TAAAACTTGTCTGCAAAATGTGCGAAAGTGACAAAATGTTTACAGAATCC
Sus scrofa clone RP44-299K15, WORKING DRAFT SEQUENCE, 10 ordered pieces.
AC134962.2:161895-161914
GATAGCCCATGAAACAAGCAGATGCTTCCT161895TAAAACTTGTCTGCAAAATGGGCGAAAGTGACAAAATGTTTACAGAATCC
Planctomycetota bacterium strain ZRK32 chromosome, complete genome.
CP066225.1:4574786-4574805
ACGGGTGCCCCCTTCGCGGCCGCAGCTTCA4574786TAAAACTTGTCTGCAAAATGAGTTACCATCACGCAATCTCCGAAAGTAGC
Caligus rogercresseyi isolate FCH chromosome 3.
CP045892.1:2600515-2600534
TGTGATATAGAGATACAAGCCCAGGAGTAA2600515TAAAACTTGTCTGCAAAATGAAATAAGAATAGAGAAAAGCTCAAGAGAGG
Peribatodes rhomboidaria genome assembly, chromosome: Z.
OU452166.1:15484769-15484788
AGTACTTATTAAACAGTAAGTATATTTAAA15484769TAAAACTTGTCTGCAAAATGTTGTACCCTATGTTACTTCCACTATAAAGA
Tholera decimalis genome assembly, chromosome: 5.
OW964553.2:1044350-1044369
TTGCAACGACCATATTCAATTTTAATGAAA1044350TAAAACTTGTCTGCAAAATGCTCTATATAAATATAAACATGCAGCACATT
Napeogenes sylphis genome assembly, chromosome: 11.
OY365787.1:9585743-9585762
TTTCTTACAACGACTTTTGAGGCGAATTTT9585743TAAAACTTGTCTGCAAAATGCTAATCTTTATCTATAGTTTGCCATACATC
Ceramica pisi genome assembly, chromosome: 13.
OY982540.1:542597-542616
TATTAGTATAGATTATGTCAGTAGATAGTC542597TAAAACTTGTCTGCAAAATGAGGTTGAATGTAAAGTTGCAAATAAATACT
Caenorhabditis plicata genome assembly, chromosome: 1.
OZ007489.1:10189302-10189321
CAGGAATGTTATATGAACAAGTACCTAAAG10189302TAAAACTTGTCTGCAAAATGTTTGAACATTCTAAATATTAAATTTGTTAC
Sus scrofa scrofa breed NS chromosome 4.
CP071555.1:41282576-41282595
GGATTCTGTAAACATTTTGTCACTTTCGCC41282576CATTTTGCAGACAAGTTTTAAGGAAGCATCTGCTTGTTTCATGGGCTATC
Sus scrofa genome assembly, chromosome: 4.
OY997211.1:40449855-40449874
GGATTCTGTAAACATTTTGTCACTTTCGCC40449855CATTTTGCAGACAAGTTTTAAGGAAGCATCTGCTTGTTTCATGGGCTATC
Pelobates cultripes genome assembly, chromosome: 04.
OW240915.1:266769568-266769587
CTCCATGAGCAAATATGTGGTTTTGGTCGA266769568CATTTTGCAGACAAGTTTTATAGTCGCTACAGTTATTAGGGTATTTGTCA
Gymnoscopelus braueri genome assembly, chromosome: 12.
OY725519.1:19775053-19775072
GGCCCCTGGTCAAATAATTGAGTTTTCACA19775053CATTTTGCAGACAAGTTTTAGTATAGGCCTAGCTACTGCTATTGCTTAAA
Sus scrofa GSS, clone WTSI_1005-808O20, end sequence WTSI_1005-808O20.R.
HE558378.1:337-356
GGATTCTGTAAACATTTTGTCACTTTCGCC337CATTTTGCAGACAAGTTTTAAGGAAGCATCTGCTTGTTTCATGGGCTATC
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-362G20.
CU179716.3:68797-68816
GGATTCTGTAAACATTTTGTCACTTTCGCC68797CATTTTGCAGACAAGTTTTAAGGAAGCATCTGCTTGTTTCATGGGCTATC
Cucumis melo isolate PI 511890 chromosome 2.
CP136103.1:851352-851371
TGTCGTAGCGTAGGACGAATTCGACGTGGC851352CATTTTGCAGACAAGTTTTACTCAAAAGTCCAATGCATGCAACAAATATA
Cucumis melo genomic scaffold, anchoredscaffold00025.
LN681806.1:842062-842081
TGTCGTAGCGTAGGACGAATTCGACGTGGC842062CATTTTGCAGACAAGTTTTACTCAAAAGTCCAATGCATGCAACAAATATA
Cucumis melo genomic chromosome, chr_2.
LN713256.1:842062-842081
TGTCGTAGCGTAGGACGAATTCGACGTGGC842062CATTTTGCAGACAAGTTTTACTCAAAAGTCCAATGCATGCAACAAATATA
Oldenlandia corymbosa var. corymbosa genome assembly, chromosome: 7.
OX459124.1:7751554-7751573
AAATTTCTGAAATAAACTGATTTGATGTGT7751554CATTTTGCAGACAAGTTTTATCCCATGTCCAGAACTATGTTTCCTGACTT
Steromphala cineraria genome assembly, chromosome: 1.
OU744720.1:42544451-42544470
TCCTGCCACTACAACTTACATGATGGTATA42544451CATTTTGCAGACAAGTTTTACCTTAACTTTTAATTATAACATTGTCGCTG
Steromphala cineraria genome assembly, chromosome: 1.
OU744720.1:42588111-42588130
TCCTGCCACGACAACTTACATGATGGTATA42588111CATTTTGCAGACAAGTTTTACCTCAACTTTTAATTATAACATTGTCGCTG
Steromphala cineraria genome assembly, chromosome: 1.
OU744720.1:42641164-42641183
TCCTGCCACGACAACTTACATGATGGTATA42641164CATTTTGCAGACAAGTTTTACCTTAACTTTTAATTATAACATTGTCGCTG
Steromphala cineraria genome assembly, chromosome: 1.
OU744720.1:42674964-42674983
TCCTGCCACGACAACTTACATGATGGTATA42674964CATTTTGCAGACAAGTTTTACCTTAACTTTTAATTATAACATTGTCGCTG
Athripsodes cinereus genome assembly, chromosome: 1.
OX388305.1:32221090-32221109
TCTTTTGGTCAATTTTTTTTATGAGATATC32221090CATTTTGCAGACAAGTTTTATTTTTAACATTATCTATTTGCAACGATCTT
Agelastica alni genome assembly, chromosome: 4.
OX467711.1:21204675-21204694
AAGATTGTAAATTTTAAGAAACAATTTCAA21204675CATTTTGCAGACAAGTTTTAGCAAGAAAATAGCAGCCAAAAAATGGTTAA
Falcaria lacertinaria genome assembly, chromosome: 8.
OX602116.1:8276085-8276104
AAAGGTCGCTTATACTTAATCGGAGTAATC8276085CATTTTGCAGACAAGTTTTATATATGACCCAGATTAACTGGACCTTCCAT
Napeogenes inachia genome assembly, chromosome: 10.
OY365801.1:15345121-15345140
GATGTATGGCAAACTATAGATAAAGATTAG15345121CATTTTGCAGACAAGTTTTAAAAATTCGCCTCAAAAGTCGTTGTAAGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAAAACTTGTCTGCAAAATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAAACTTGTCTGCAAAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.156 | 0.147 | search_plus_done; http://172.18.8.135:50400/match?q=TAAAACTTGTCTGCAAAATG&k=0&no_gap=0&offset=0&limit=50
0.324 | 0.168 | search_minus_done; http://172.18.8.135:50400/match?q=CATTTTGCAGACAAGTTTTA&k=0&no_gap=0&offset=0&limit=39
0.336 | 0.013 | cgi_end;

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