GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:52:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC10m24_087, unspecified EST.
FY457761.1:27-46
GTGGCGGTTACCGGTGAAAACCGTTA27TAAAGATTTGAGCCCTTCGCGTAACCACCATTAACGTCTACGAAACAAAG
Sphagnum contortum genome assembly, chromosome: 10.
OY987285.1:11655179-11655198
TAAACTAAGGTAAATAGGTTGTAATAATTA11655179TAAAGATTTGAGCCCTTCGCCTCCACAATGAAGGGCAAAGTGTTTACAAT
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:52988535-52988554
CTTTGTTTCGTAGACGTTAATGGTGGTTAC52988535GCGAAGGGCTCAAATCTTTATAACGGTTTTCACCGGTAACCGCCACTCAC
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:55623924-55623943
GTTTGTTTCGTAGACGTTGATGGCGGTTAC55623924GCGAAGGGCTCAAATCTTTATAACGGTTTTCACCGGTCAACCGCCACTCA
Antiaris toxicaria isolate JCLG002 chromosome 3.
CP141168.1:66691974-66691993
AGCTGAATACTGGTTGGCTCAGAATAAAGA66691974GCGAAGGGCTCAAATCTTTAAAGCCCGAAAAGAAGAAAAGACACAAGCTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAAAGATTTGAGCCCTTCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAAGATTTGAGCCCTTCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.228 | 0.219 | search_plus_done; http://172.18.8.135:50400/match?q=TAAAGATTTGAGCCCTTCGC&k=0&no_gap=0&offset=0&limit=50
0.254 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GCGAAGGGCTCAAATCTTTA&k=0&no_gap=0&offset=0&limit=48
0.256 | 0.002 | cgi_end;

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