GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:36:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

OPZE00297 Elaeis guineensis zygotic embryo Elaeis guineensis cDNA clone 23-C11-T3.seq, mRNA sequence.
EL695208.1:31-52
CTCTCGTGCCGAATTCGGCACGAGGTTTAA31TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
OPZE00317 Elaeis guineensis zygotic embryo Elaeis guineensis cDNA clone 23-F07-T3.seq, mRNA sequence.
EL695228.1:623-644
ACGTGCCTTGAGAAATTATGTTAGGTTTAA623TGGTCGGGTCTAGTTTCTATTAAGAGAATATGGTAAAGATCTAGTTAGCCTC
OPZE00320 Elaeis guineensis zygotic embryo Elaeis guineensis cDNA clone 23-F10-T3.seq, mRNA sequence.
EL695231.1:617-638
ACGTGCCTTGAGAAATTATGTTAGGTTTAA617TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
OPZE00431 Elaeis guineensis zygotic embryo Elaeis guineensis cDNA clone 7-C07-T3.seq, mRNA sequence.
EL695340.1:615-636
ACGTGCCTTGAGAAATTATGTTAGGTTTAA615TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
OPZE00496 Elaeis guineensis zygotic embryo Elaeis guineensis cDNA clone 8-A09-T3.seq, mRNA sequence.
EL695405.1:573-594
ACGTGCCTTGAGAAATTATGTTAGGTTTAA573TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
OPZE00537 Elaeis guineensis zygotic embryo Elaeis guineensis cDNA clone 8-E10-T3.seq, mRNA sequence.
EL695446.1:599-620
ACGTGCCTTGAGAAATTATGTTAGGTTTAA599TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
pOP-EAP03376_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP03376 5', mRNA sequence.
EY405343.1:260-281
ACGTGCCTTGAGAAATTATGTTAGGTTTAA260TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
pOP-EAP02388_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP02388 5', mRNA sequence.
EY407132.1:403-424
ACGTGCCTTGAGAAATTATGTTAGGTTTAA403TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAG
pOP-EAP01642_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP01642 5', mRNA sequence.
EY407411.1:239-260
ACGTGCCTTGAGAAATTATGTTAGGTTTAA239TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
pOP-EAP03303_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP03303 5', mRNA sequence.
EY407632.1:188-209
ACGTGCCTTGAGAAATTATGTTAGGTTTAA188TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC
pOP-EAP03160_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP03160 5', mRNA sequence.
EY407741.1:421-442
ACGTGCCTTGAGAAATTATGTTAGGTTTAA421TGGTCGGGTCTAGTTTCTATTAAGAAAATATGGTAAAGATCTAGTTAGCCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAATAGAAACTAGACCCGACCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAATAGAAACTAGACCCGACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=TAATAGAAACTAGACCCGACCA&k=0&no_gap=0&offset=0&limit=50
0.799 | 0.705 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTCGGGTCTAGTTTCTATTA&k=0&no_gap=0&offset=0&limit=50
0.807 | 0.008 | cgi_end;

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