GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-01-10 17:38:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Prunus dulcis DNA, pseudomolecule Pd06.
AP019302.1:20015617-20015640
TCTCAATACGAGATGAGATATTAACATGAT20015617TACCTTTGTAGTTAAGAGCTTTTGGAGCTTCACCGCTGTTTTTCATTTTCCTGA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:24555963-24555986
AACTCATACCACATGAGATACAAACAGAAT24555963TACCTTTGTAGTTAAGAGCTTTTGGAGCTTCGCCACTTTTTTTCATTTTCCTAA
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:15793463-15793486
TTAGGAAAATGAAAAAAAGTGGCGAAGCTC15793463CAAAAGCTCTTAACTACAAAGGTAATTCTGTTTGTATCTCATGTGGTATGAGTT
Geum urbanum genome assembly, chromosome: 4.
OX327000.1:21899114-21899137
TTAGAAAAATGAAAAAAAGTGGTGAAGCTC21899114CAAAAGCTCTTAACTACAAAGGTAATTTGGTTTGTGTTGTATGTGTAATAGAAA
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:12291382-12291405
TTAGGAAAATGAAAAAAAGTGGAGAAGCTC12291382CAAAAGCTCTTAACTACAAAGGTAATTCTGTTTGTATCTCATGTGGTATGATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TACCTTTGTAGTTAAGAGCTTTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TACCTTTGTAGTTAAGAGCTTTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.092 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=TACCTTTGTAGTTAAGAGCTTTTG&k=0&no_gap=0&offset=0&limit=50
0.109 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAAGCTCTTAACTACAAAGGTA&k=0&no_gap=0&offset=0&limit=48
0.111 | 0.002 | cgi_end;

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