GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:48:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Phalacrocorax carbo genome assembly, chromosome: 1.
OY997601.1:133212300-133212318
AAAAAGAAAAAAGGATGGAAGAAGAAAATA133212300TAGGAATTGGTACGCAGTCGAAAGCTAAGAACTGAGACAGCATTTTCAA
Sequence 211 from Patent WO03052141.
AX795642.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCGTTACGGTTGTT
Sequence 212 from Patent WO03052141.
AX795643.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCTACGGTTGTTCC
Sequence 213 from Patent WO03052141.
AX795644.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGGTATCACTGGCTG
Sequence 214 from Patent WO03052141.
AX795645.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGATCACTGGCTGGA
Sequence 211 from Patent WO03052142.
AX796934.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCGTTACGGTTGTT
Sequence 212 from Patent WO03052142.
AX796935.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCTACGGTTGTTCC
Sequence 213 from Patent WO03052142.
AX796936.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGGTATCACTGGCTG
Sequence 214 from Patent WO03052142.
AX796937.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGATCACTGGCTGGA
Sequence 211 from Patent WO03052140.
AX797196.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCGTTACGGTTGTT
Sequence 212 from Patent WO03052140.
AX797197.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCTACGGTTGTTCC
Sequence 213 from Patent WO03052140.
AX797198.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGGTATCACTGGCTG
Sequence 214 from Patent WO03052140.
AX797199.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGATCACTGGCTGGA
JP 2005512549-A/211: Analysis and detection of multiple target sequences using circular probes.
DD175805.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCGTTACGGTTGTT
JP 2005512549-A/212: Analysis and detection of multiple target sequences using circular probes.
DD175806.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCTACGGTTGTTCC
JP 2005512549-A/213: Analysis and detection of multiple target sequences using circular probes.
DD175807.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGGTATCACTGGCTG
JP 2005512549-A/214: Analysis and detection of multiple target sequences using circular probes.
DD175808.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGATCACTGGCTGGA
Sequence 211 from patent US 7498131.
GP233200.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCGTTACGGTTGTT
Sequence 212 from patent US 7498131.
GP233201.1:22-40
TCACAAGCTCCCATCGCATCA22TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGCTACGGTTGTTCC
Sequence 213 from patent US 7498131.
GP233202.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGGTATCACTGGCTG
Sequence 214 from patent US 7498131.
GP233203.1:25-43
AACTCTCAATTTTTCAACCTTCTC25TAGGAATTGGTACGCAGTCGATGAGTCCTGAGTAAGATCACTGGCTGGA
136 cDNAs of Manduca sexta regurgitant induced Nicotiana attenuata genes isolated by cDNA-AFLP display Nicotiana attenuata cDNA clone DH03 5', mRNA sequence.
CA591821.1:151-169
TTCAGTGGTGCAATGTTCTGTCTGTAGAAA151TAGGAATTGGTACGCAGTCTACGAG
154 cDNAs of Manduca sexta regurgitant induced Nicotiana attenuata genes isolated by cDNA-AFLP display Nicotiana attenuata cDNA clone DH21 5', mRNA sequence.
CA591839.1:151-169
TTCAGTGGTGCAATGTTCTGTCTGTAGAAA151TAGGAATTGGTACGCAGTCTACGAG
163 cDNAs of Manduca sexta regurgitant induced Nicotiana attenuata genes isolated by cDNA-AFLP display Nicotiana attenuata cDNA clone DH30 5', mRNA sequence.
CA591848.1:106-124
AGTTCCAAACTTCTCGTTATCATATTGGAA106TAGGAATTGGTACGCAGTCTACGAG
Quercus petraea/Quercus robur mixed clone library EST, clone 6J1-1_R.
FR877981.1:284-302
GAATTTTGAATGGTACAGGGTAGTTTGGAT284TAGGAATTGGTACGCAGTCA
EST0043 leaves of tea plant induced by Empoasca vitis Gothe feeding Camellia sinensis cDNA clone L159, mRNA sequence.
HO079225.1:220-238
TACGTAATGTGGCTTTACTATTATTATTGA220TAGGAATTGGTACGCAGTCA
TDF0571a Oncidium hybrid cultivar Milliongolds flower development cDNA-AFLP Oncidium hybrid cultivar cDNA clone TDF0571, mRNA sequence.
JG014480.1:159-177
ACGCAGTCATGATGAGTCCTGAGTAAGCGG159TAGGAATTGGTACGCAGTCTACAAGATGATGAGTCCTGAGTAATCGATT
TDF0855a Oncidium hybrid cultivar Milliongolds flower development cDNA-AFLP Oncidium hybrid cultivar cDNA clone TDF0855, mRNA sequence.
JG014539.1:51-69
AGTAACGTGGAGTCCGAAGAGCAGATGCTT51TAGGAATTGGTACGCAGTCTACGAGATGATGAGTCCTGAGTAATTGGTA
TDF1129a Oncidium hybrid cultivar Milliongolds flower development cDNA-AFLP Oncidium hybrid cultivar cDNA clone TDF1129, mRNA sequence.
JG014609.1:204-222
ACGCAGTCACGATGAGTCCTGAGTAAGCGG204TAGGAATTGGTACGCAGTCATGATGAGTCCTGAGTAACAGTAGAATTGG
EST029 cDNA-AFLP of Tea Looper (Ectropic oblique) eclipsed tea plant leaves Camellia sinensis cDNA clone 18C1, mRNA sequence.
JK714361.1:449-467
TTCTATACCCCGGTTGGTCACAAGGAAGCC449TAGGAATTGGTACGCAGTCA
EST032 cDNA-AFLP of Tea Looper (Ectropic oblique) eclipsed tea plant leaves Camellia sinensis cDNA clone 18F2, mRNA sequence.
JK714364.1:211-229
GACTCTGACAGATATTTTCATTGAGAGGGG211TAGGAATTGGTACGCAGTCA
Barcode_AGTCAA_contig_2261 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS791960.1:98-116
TAACAACAGCAGAAAATGAAGAAATAAATA98TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_4341 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS793675.1:593-611
TTTTACGGCATCCTTACCGCAGATGAGCTT593TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_8348 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS797018.1:88-106
TAGAAATCTTGTTGTTGCAAATAATGAGTC88TAGGAATTGGTACGCAGTCTCCTGAGTAAGAAAAAATCTCTGAATCCAA
Barcode_AGTCAA_contig_11125 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS799278.1:480-498
ATTCGACAAAGGAATTGAAGGCAGAAAGTC480TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_11675 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS799733.1:44-62
ATACACGATTCTCGTTGTTTTTGATTTCTT44TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_14112 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS801712.1:467-485
AAAAGATATTTGAGGTGTCTGATACAGGAA467TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_15493 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS802842.1:32-50
CCTGAGTAAAGCAACCTAAGATTTCTAAAT32TAGGAATTGGTACGCAGTCAGTTCAGCCATCCCTGCCCCGGAAGATGAT
Barcode_AGTCAA_contig_16609 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS803725.1:161-179
TTAGAGAGGCAAAGGATTCTGTAGAAAAAA161TAGGAATTGGTACGCAGTCTTGCAAGAACTTTGCTTGCAATAGAAAGAG
Barcode_AGTCAA_contig_18550 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS805283.1:237-255
AGGATCCTGAGTAAAGCACATTTTTTACTT237TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_20139 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS806719.1:330-348
GTAATCCAATGCTGAACCGAGGATTGCTGT330TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_24974 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS811015.1:136-154
GGTCTTCTTCTTTCAGAGCTTCCAGTTTTG136TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_57137 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS838209.1:366-384
TCGATCCTGAGTAATCTCAGTCAGCTCAAC366TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_63832 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS843611.1:55-73
CCAGTCAATTGGCTCTAACCCATGTTCTTT55TAGGAATTGGTACGCAGTCTCCTGAGTAAATTGGAGGTCTTATTTTATG
Barcode_AGTCAA_contig_68511 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS847419.1:316-334
TGCGATTATTCAAGAAATGTCTTTTAGTTC316TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_72113 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS850405.1:411-429
TTACATTTACTTTTTGTTTTGATATTTTTA411TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_79731 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS856713.1:157-175
TCACAATTGCTTCAAAGAGAATAAAATACC157TAGGAATTGGTACGCAGTCAAGGGATGTGAAGGACCTCTTCAAGGAGAA
Barcode_AGTCAA_contig_80118 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS857067.1:157-175
TCACAATTGCTACAAAGAGAATAAAATACC157TAGGAATTGGTACGCAGTCAAGGGACTGAAAGGACCTCTTCAAGGAGAT
Barcode_AGTCAA_contig_80997 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS857851.1:213-231
TATTTTTTTCTCTTGCCTAATTGCTCTGGC213TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_82984 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS859724.1:42-60
TGATGAGTTACCTGACTTTTTGATTGCATC42TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_99522 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS874573.1:139-157
TGTAAACGGTCCTGAGTAAAGGCAGTTATT139TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_120423 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS894674.1:108-126
CAAGGGAGGCTGGTAAGTTTGTTCTAATCT108TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_122343 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS896240.1:34-52
TGAGTAATAATGCCAATTTAGCAAGTCATT34TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_129386 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS901997.1:276-294
AAGGCTGTGTAAGAGAATTTAGAGAAGAAT276TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_131192 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS903478.1:190-208
TATTGTTTTTGTTTGTTGGAGTTTTCTTTT190TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_138136 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS909469.1:303-321
TGCCTCCTGTCAGATCACATTAGATTCAAA303TAGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_143360 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS914214.1:178-196
CATAGAAGCTTTATGCTATTACAATGCTTT178TAGGAATTGGTACGCAGTCAGGA
Barcode_AGTCAA_contig_160676 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS929749.1:163-181
TGATTCAGTCTTTAGTAGGTTTTTTGTTTC163TAGGAATTGGTACGCAGTCATTTAGGTTATTCATTTTTTTTTGGTTTAC
Oncorhynchus mykiss clone TG84-7, sequence tagged site.
AF239028.1:397-415
TAAACACATAGGGGGGCTCGGCTCTCTTCC397TAGGAATTGGTACGCAGTCTACGAG
Glycine max DNA, AFLP marker CSTS490.
AB454020.1:410-428
GTTCATATGGGGTAACCTTATTCCTTTTGT410TAGGAATTGGTACGCAGTC
Humulus scandens male-specific AFLP fragment E53M20 genomic sequence.
KX428510.1:164-182
GCTCGGGACGTGGGGTTGTGAACCAGGACT164TAGGAATTGGTACGCAGTC
Humulus scandens male-specific AFLP fragment E53M30 genomic sequence.
KX428511.1:152-170
TGATTGGAAATTCCATTTGGATTTGGTTTT152TAGGAATTGGTACGCAGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAGGAATTGGTACGCAGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGGAATTGGTACGCAGTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
2.017 | 2.009 | search_plus_done; http://172.18.8.135:50400/match?q=TAGGAATTGGTACGCAGTC&k=0&no_gap=0&offset=0&limit=50
2.091 | 0.073 | search_minus_done; http://172.18.8.135:50400/match?q=GACTGCGTACCAATTCCTA&k=0&no_gap=0&offset=0&limit=0
2.091 | 0.000 | cgi_end;

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