GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 22:22:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjB17J16, BM1988a.
AP010307.1:89645-89664
TCTCTCTCTCTCTCTCTGTCTGTCTCTCTC89645TATCTCTCTATTGCGCAGCCGCCAGCGACTAAGAATTATAAGTTATGGTA
Lotus japonicus genomic DNA, chromosome 5, clone: LjB01H03, BM1799.
AP010309.1:58405-58424
TCTCTCTCTCTCTCTCTGTCTGTCTCTCTC58405TATCTCTCTATTGCGCAGCCGCCAGCGACTAAGAATTATAAGTTATGGTA
Watersipora subatra genome assembly, chromosome: 4.
OY755161.1:57341260-57341279
CATGTTGGCCAATGTTTGATAATGAAAATT57341260TATCTCTCTATTGCGCAGCCAATTGTAAACCTTGTCAACATAGAATATAT
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:8861675-8861694
TACCATAACTTATAATTCTTAGTCGCTGGC8861675GGCTGCGCAATAGAGAGATAGAGAGAGACAGACAGAGAGAGAGAGAGAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TATCTCTCTATTGCGCAGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TATCTCTCTATTGCGCAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=TATCTCTCTATTGCGCAGCC&k=0&no_gap=0&offset=0&limit=50
0.110 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTGCGCAATAGAGAGATA&k=0&no_gap=0&offset=0&limit=47
0.111 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).