GGGenome | Results

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2025-04-14 02:52:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Rhinatrema bivittatum genome assembly, chromosome: 9.
LR584395.1:55096555-55096574

AGCTACTAGGTACTTCTAAATCCATTACTT55096555TATTTGGGATGCACACTCCAAACGATTTAACTCATTTCTGTAAGTTAAAC

Solanum melongena mRNA, clone: SmFL10A18, 3'end.
FS072809.1:211-230

AATCACTCTGCGAAATAAATTAGCTACACA211TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC

Solanum melongena mRNA, clone: SmFL11F16, 3'end.
FS073757.1:211-230

AATCACTCTGCGAAATAAATTAGCTACACA211TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC

Solanum melongena mRNA, clone: SmFL12P08, 3'end.
FS074889.1:213-232

AATCACTCTGCGAAATAAATTAGCTACACA213TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC

Solanum melongena mRNA, clone: SmFL35B23, 3'end.
FS090240.1:200-219

AATCACTCTGCGAAATAAATTAGCTACACA200TATTTGGGATGCACACTCCACCTTCTGGATTTTGTTGTTCTTTCCATATC

Sarcophaga caerulescens genome assembly, chromosome: 5.
OV656868.1:79469694-79469713

ATTTATGCACCAGAGTCATTAAAAATTGAA79469694TATTTGGGATGCACACTCCATTTTTCAAACGCGTAAAAAATGTCGATGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.453 | 0.444 | search_plus_done; http://172.18.8.135:50400/match?q=TATTTGGGATGCACACTCCA&k=0&no_gap=0&offset=0&limit=50
0.483 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGTGTGCATCCCAAATA&k=0&no_gap=0&offset=0&limit=44
0.483 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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