GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:25:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS10029H07 KS10 Capsicum annuum cDNA, mRNA sequence.
CA519768.1:214-235
GAAGTCCTTCTTTCTGGTTTTACAATTAAC214TCAACATTACGTCGTGGAACTCACTTAGTTCAATCCTTCTCTGTTGTCTTCC
KS24039A06 KS24 Capsicum annuum cDNA, mRNA sequence.
GD121462.1:232-253
GAAGTCCTTCTTTCTGGTTTTACAATTAAC232TCAACATTACGTCGTGGAACTCACTTAGTTCAATCCTTCTCTGTTGTCTTCC
TSA: Capsicum annuum MA_MegaContig_30843, mRNA sequence.
JW160338.1:303-324
GAAGTCCTTCTTTCTGGTTTTACAATTAAC303TCAACATTACGTCGTGGAACTCACTTAGTTCAATCCTTCTCTGTTGTCTTCC
TSA: Capsicum annuum MGMT_Contig16774, mRNA sequence.
JW067018.1:808-829
GGAAGACAACAGAGAAGGATTGAACTAAGT808GAGTTCCACGACGTAATGTTGAGTTAATTGTAAAACCAGAAAGAAGGACTTC
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:161280530-161280551
GGAAGACAACAGAGAAGGATTGAACTAAGT161280530GAGTTCCACGACGTAATGTTGAGTTAATTGTAAAACCAGAAAGAAGGACTTC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:162084530-162084551
GGAAGACAACAGAGAAGGATTGAACTAAGT162084530GAGTTCCACGACGTAATGTTGAGTTAATTGTAAAACCAGAAAGAAGGACTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAACATTACGTCGTGGAACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAACATTACGTCGTGGAACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.248 | 0.239 | search_plus_done; http://172.18.8.135:50400/match?q=TCAACATTACGTCGTGGAACTC&k=0&no_gap=0&offset=0&limit=50
0.278 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTTCCACGACGTAATGTTGA&k=0&no_gap=0&offset=0&limit=47
0.280 | 0.002 | cgi_end;

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