GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 22:20:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC01j18_086, unspecified EST.
FY454863.1:530-549
AAATTGAGTTTAGCCCTCGGTCCACGGAAC530TCAATCGCGGCATTATCATAAGCTCTAGCAGCTTCTTCAGCAGTTGTAAA
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:15285913-15285932
AAATTGAGTTTAGCCCTCGGTCCACGGAAC15285913TCAATCGCGGCATTATCATAAGCTCTTGCAGCTTCTTCAGCAGTTGTAAA
Trifolium repens mRNA, clone: WCC01j18_5, unspecified EST.
FY454864.1:420-439
TTTACAACTGCTGAAGAAGCTGCTAGAGCT420TATGATAATGCCGCGATTGAGTTCCGTGGACCGAGGGCTAAACTCAATTT
Canna indica chromosome 8.
CP136897.1:70318544-70318563
GCAGTTGATGTTCTGTTAGAATTTTATCAA70318544TATGATAATGCCGCGATTGACTTGAATTAAAAATTAATATTATATTAAAA
Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:41484140-41484159
TTTACTACTGCTGAAGAAGCTGCTAGAGCT41484140TATGATAATGCCGCGATTGAGTTTCGTGGACCGAGGGCTAAGCTTAATTT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:47432224-47432243
TTTACAACTGCTGAAGAAGCTGCTAGAGCT47432224TATGATAATGCCGCGATTGAGTTCCGTGGGCCGCGGGCTAAGCTTAATTT
Salinivibrio kushneri strain TGB11 plasmid unnamed, complete sequence.
CP114589.1:349006-349025
CACTCAGAGCACGGCCCATCACATTTGTTT349006TATGATAATGCCGCGATTGAATTAAAGCCGTATCAAGCTAATGGCTAATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAATCGCGGCATTATCATA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAATCGCGGCATTATCATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.195 | 0.187 | search_plus_done; http://172.18.8.135:50400/match?q=TCAATCGCGGCATTATCATA&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=TATGATAATGCCGCGATTGA&k=0&no_gap=0&offset=0&limit=48
0.309 | 0.003 | cgi_end;

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