GGGenome | Results

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2025-04-10 21:19:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Sus scrofa genome assembly, chromosome: 10.
OY997217.1:69446274-69446293

TTTCATGGACTTAATTTTTTTAGAGCAGTT69446274TCAGGTTCACAGCAACATCCAGGTGCAAGTCCAGAGAGTTCTGGTATAGC

Psittacula echo genome assembly, chromosome: Z.
OY725424.1:36160859-36160878

TAAAATATGTACCTGTACACTCAAGAGCAT36160859TCAGGTTCACAGCAACATCCTGCTTCCTTTTTAAACAGAATAATACTCCT

Paracoccaceae bacterium isolate 10153035-b165-4c8b-ac50-65522573d5ce genome assembly, chromosome: 5.
OY760887.1:19470-19489

CCATGGCCTCGCGTGCCACCTTTTCCACGC19470TCAGGTTCACAGCAACATCCTCGATCAAGCGGCCCACGAGAAACTCCATG

Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-310M24.
CU915555.2:136229-136248

TTTCATGGACTTAATTTTTTTAGAGCAGTT136229TCAGGTTCACAGCAACATCCAGGTGCAAGTCCAGAGAGTTCTGGTATAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.126 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGGTTCACAGCAACATCC&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GGATGTTGCTGTGAACCTGA&k=0&no_gap=0&offset=0&limit=46
0.152 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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