GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:23:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EG_Bb118I07.R EG_Bb Eucalyptus grandis genomic 3', genomic survey sequence.
JM500648.1:351-376
AAAGTCGGCTTAAGAAGGATGGGTAGGCTT351TCAGTTTGGATGGGAGGCGAAGAGGGAAAATGTGTATAAATATGTGGAACTCGACA
Eucalyptus camaldulensis mRNA, clone: EDS006O23, 5'-EST.
FY787029.1:158-183
TGTCGAGTTCCACATATTTATACACATTCT158CCCTCTTCGCCTCCCATCCAAACTGAAAGCCTACCCATCCTTCTTAAGCCGACTTT
Eucalyptus camaldulensis mRNA, clone: Leaf_004_000029C02, 5'-EST.
FY797414.1:161-186
TGTCGAGTTCCACATATTTATACACATTCT161CCCTCTTCGCCTCCCATCCAAACTGAAAGCCTACCCATCCTTCTTAAGCCGACTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAGTTTGGATGGGAGGCGAAGAGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGTTTGGATGGGAGGCGAAGAGGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.148 | 0.139 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGTTTGGATGGGAGGCGAAGAGGG&k=0&no_gap=0&offset=0&limit=50
0.297 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTCTTCGCCTCCCATCCAAACTGA&k=0&no_gap=0&offset=0&limit=49
0.299 | 0.002 | cgi_end;

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