GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 21:11:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

ICPM1G04 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1G04 5', genomic survey sequence.
FI131393.1:240-259
GATTATGCTTGGCGTCGGCTTAGTTTGGTT240TCATGGGTGCATTGTTTGATTCGAGTATTTATTAGGGTTTTTGCATTCAT
Phragmites australis genome assembly, chromosome: 17.
OY282628.1:12618492-12618511
ATTGTTTAAGTGCATGATCAGGCTTTTGTG12618492TCATGGGTGCATTGTTTGATCCCTGCGTGGATCCCCTCTTCTGATCGTGT
Bombyx mori Nichi01 DNA, chromosome 9, complete sequence.
AP026190.1:1372407-1372426
CGCGACTTATACTCTAGAGTCTAGACAATT1372407ATCAAACAATGCACCCATGAAACACATACAGGATGTAGGAAAACGCATCC
Bombyx mandarina Sakado DNA, chromosome 09, sequence.
AP028291.1:1377800-1377819
CGCGACTTATACTCTAGAGTCTAGACAATT1377800ATCAAACAATGCACCCATGAAACACATACAGGATGTAGGAAAACGCATCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCATGGGTGCATTGTTTGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATGGGTGCATTGTTTGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.114 | 0.105 | search_plus_done; http://172.18.8.135:50400/match?q=TCATGGGTGCATTGTTTGAT&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAAACAATGCACCCATGA&k=0&no_gap=0&offset=0&limit=48
0.130 | 0.001 | cgi_end;

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