GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-01-10 17:30:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Inachis io genome assembly, chromosome: 1.
LR989896.1:2519425-2519446
GATAAGTGAGTTCGCGACGTAGCTTTTTGC2519425TCATTGGTACTAGAGGCAGGTGAGTGGATTTTATCGTTGGATGAATTGATTC
PP_LBa0048-D01.F PP_LBa Prunus persica genomic 5', genomic survey sequence.
FI955735.1:323-344
CAAAGGAAGGTCCATACGAGTTCAAGCCTG323CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCTATTCA
ROSCOS_1431 Peach Genome SNP, InDel Search Library Prunus persica genomic, genomic survey sequence.
GS598136.1:155-176
CAAAGGAAGGTCCATACGAGTTCAAGCCTG155CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCCATTCA
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:12093892-12093913
CAAAGGAAGGTCCATATGAATTCAAGCCTG12093892CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCTATTCA
Dryas octopetala genome assembly, chromosome: 9.
OY992840.1:13956292-13956313
CAAAGGAAGGTCCATATGAATTCAAGCCCG13956292CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCTATTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCATTGGTACTAGAGGCAGGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATTGGTACTAGAGGCAGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=TCATTGGTACTAGAGGCAGGTG&k=0&no_gap=0&offset=0&limit=50
0.183 | 0.073 | search_minus_done; http://172.18.8.135:50400/match?q=CACCTGCCTCTAGTACCAATGA&k=0&no_gap=0&offset=0&limit=49
0.185 | 0.003 | cgi_end;

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