GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 20:53:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Blennius ocellaris genome assembly, chromosome: 12.
OY730212.1:27265782-27265801
GTCTGCATGTCTCCATCCAGCATGTCTCCA27265782TCCAGCATGTCTCTGTCCAGCATCTGCATCTTTTCGTCCAGCACGTCTCC
Blennius ocellaris genome assembly, chromosome: 12.
OY730212.1:27265898-27265917
ATCCAATGTGTCTCCATCTGCATGTCTTCA27265898TCCAGCATGTCTCTGTCCAGCGTCTGCATGTCTCTGTTCAGCATGTCTCC
Gallus gallus breed Huxu chromosome 5.
CP100559.1:51711746-51711765
TGCACTCAAGGAAGCTCAGCAGCAACTACA51711746CTGGACAGAGACATGCTGGAGCTACAGCCACCTTTGGAAGAAGGGAGCTT
Thalassophryne amazonica genome assembly, chromosome: 3.
LR722968.1:108594076-108594095
GCCAGCTACATTGATGAGCCTTTCATGGAG108594076CTGGACAGAGACATGCTGGACGATTGACCTGCAGAACGTGCATTCAGTGT
Meleagris gallopavo genome assembly, chromosome: 5.
OW982257.1:52807214-52807233
TGCACTCAAGGAAGCTCAGCAGCAACTATA52807214CTGGACAGAGACATGCTGGAGCTACAGCCACCTTTGGAAGAAGACAGCTG
Meleagris gallopavo genome assembly, chromosome: 5.
OW982296.1:53736316-53736335
TGCACTCAAGGAAGCTCAGCAGCAACTATA53736316CTGGACAGAGACATGCTGGAGCTACAGCCACCTTTGGAAGAAGACAGCTG
Falco punctatus genome assembly, chromosome: 7.
OY723440.1:14474967-14474986
ATTGTCACCTTCTTTGAAACTGTCCTTAAA14474967CTGGACAGAGACATGCTGGAGAAACAGGGTTTGTGATCGCTGTTGGTGCC
Arachis hypogaea DNA, clone: AHGS48F08.
DH961608.1:401-420
AGGCAATGACAAGATGGAGGTGGCGACAAC401CTGGACAGAGACATGCTGGATGTGACGACGACCTAGACAGAAACGAGTTA
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:94705475-94705494
AGGCAATGACAAGATGGAGGTGGCGACAAC94705475CTGGACAGAGACATGCTGGATGTGACGACGACCTAGACAGAAACGAGTTA
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:94350945-94350964
AGGCAATGACAAGATGGAGGTGGCGACAAC94350945CTGGACAGAGACATGCTGGATGTGACGACGACCTAGACAGAAACGAGTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCAGCATGTCTCTGTCCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCAGCATGTCTCTGTCCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=TCCAGCATGTCTCTGTCCAG&k=0&no_gap=0&offset=0&limit=50
0.168 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=CTGGACAGAGACATGCTGGA&k=0&no_gap=0&offset=0&limit=48
0.173 | 0.005 | cgi_end;

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