GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:01:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Scleropages formosus genome assembly, chromosome: 20.
LR584085.1:21691036-21691055
TTGGGGATCTGGGTGAAGGTGGAGAGTGAG21691036TCCCTGGTGAAAGTCCTATGGAACACAGAAGACACTCCAGAAGGGGCAAA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:130293444-130293463
CTCAATCTTTGACTGCTTCTCACTAATGAA130293444CATAGGACTTTCACCAGGGACATGCTGATAGCCAGGCATCTTCTGAGCGG
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:136279255-136279274
CTCAATCTTTGACTGCTTCTCACTAATGAA136279255CATAGGACTTTCACCAGGGACATGCTGATAGCCAGGCATCTTCTGAGCGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCCTGGTGAAAGTCCTATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCTGGTGAAAGTCCTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCTGGTGAAAGTCCTATG&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=CATAGGACTTTCACCAGGGA&k=0&no_gap=0&offset=0&limit=49
0.152 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).