GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:29:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Humulus lupulus genome assembly, chromosome: 8.
OY720655.1:170211925-170211946
ATGGGAGCTAGATTATTCATTATTTCATAT170211925TCCTCTTCTTAAATTTTCTTGGGTAGACAACAATACTGGAGTTAAAAAATGA
Malus x robusta genome assembly, chromosome: 10.
OY720334.1:2020319-2020340
AAGAAAACGTGTTTGGAAGGTGAGAATGTG2020319CCAAGAAAATTTAAGAAGAGGAGAGAGAGGAATGTAGTACTGTTAAGTTTCA
Humulus lupulus genome assembly, chromosome: 1.
OY720647.1:281072760-281072781
ATCAGTTCTGACTCCAATATTATTGTCTAC281072760CCAAGAAAATTTAAGAAGAGGAATACGAAACAATGAATAATCTAGCTCCCAT
Humulus lupulus genome assembly, chromosome: 3.
OY720649.1:131614153-131614174
GTCAGTTCTAACTCCATTATAGTTGCATAC131614153CCAAGAAAATTTAAGAAGAGGAATACGAAATAATGAATAATCTAGCTACCAT
Humulus lupulus genome assembly, chromosome: 8.
OY720655.1:129490334-129490355
GTCAGTTTTAACTCCAGTATTGTTGTTTAC129490334CCAAGAAAATTTAAGAAGAGGAATACGAAATAATGAATAATCTAGCTCTCAT
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:13923989-13924010
AAGAAAATGTGTTTGGAAGGTGGGAATGTG13923989CCAAGAAAATTTAAGAAGAGGAGAGAGAAGAATGTAGTACCGTTAAGTTTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCTCTTCTTAAATTTTCTTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTCTTCTTAAATTTTCTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTCTTCTTAAATTTTCTTGG&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAGAAAATTTAAGAAGAGGA&k=0&no_gap=0&offset=0&limit=49
0.115 | 0.003 | cgi_end;

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