GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:35:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC38o11_079, unspecified EST.
FY467701.1:11-30
AATGTCATTT11TCCTTAGCACGACAACACCAGTAGTAGCACAAAACTCTCTCTCTCTCTCT
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:53899525-53899544
TCTAAAGTCGTGAAAAACCAAATGTCATTT53899525TCCTTAGCACGACAACACCAGTAGTAGCACAAAACTCTCTCTCTCTCTCT
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:54490748-54490767
TCTAAAGTGGTGAAAAACCAAATGTCATTT54490748TCCTTAGCACGACAACACCAGTAAGCACAAAACTCTCTCTCTCTCTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCTTAGCACGACAACACCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTTAGCACGACAACACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.172 | 0.163 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTTAGCACGACAACACCA&k=0&no_gap=0&offset=0&limit=50
0.188 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTGTTGTCGTGCTAAGGA&k=0&no_gap=0&offset=0&limit=47
0.188 | 0.000 | cgi_end;

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