GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-08 20:02:07, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:136730903-136730922
ACTATCACAGTATGTGTTTCAAGATTCTCT136730903TCGCTGTTAATTTCCTATCCCCCAAACATAATAATAAGAGTAAAACCCTT
Carex depauperata genome assembly, chromosome: 21.
OZ078188.1:19005612-19005631
TATAATTAATGTCATGACCTATGACAAGCA19005612TCGCTGTTAATTTCCTATCCATAAACAATTAAACATACAAAAATTAATTA
Hymenolepis microstoma genome assembly, chromosome: 3.
LR215991.1:15122276-15122295
AAAATTGAATTTGAATTTTAATTACATAGT15122276TCGCTGTTAATTTCCTATCCTATGCTTATGCCTTTTAACTGTATTCCCAA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT17M09, TM0105.
AP004939.1:32384-32403
AAGGGTTTTACTCTTATTATTATGTTTGGG32384GGATAGGAAATTAACAGCGAAGAGAATCTTGAAACACATACTGTGATAGT
Lasioglossum lativentre genome assembly, chromosome: 1.
OU744355.1:27711168-27711187
CTGGCAGGATTGCAGCGTCGTCGATTACCT27711168GGATAGGAAATTAACAGCGACTGATAAGAGCACACCCGAGGAACGGATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCGCTGTTAATTTCCTATCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGCTGTTAATTTCCTATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.362 | 0.353 | search_plus_done; http://172.18.8.135:50800/match?q=TCGCTGTTAATTTCCTATCC&k=0&no_gap=0&offset=0&limit=50
0.476 | 0.115 | search_minus_done; http://172.18.8.135:50800/match?q=GGATAGGAAATTAACAGCGA&k=0&no_gap=0&offset=0&limit=47
0.478 | 0.001 | cgi_end;

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