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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 22:18:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:25146060-25146079
CAAAACACTTTGCATCCAAGATCCCAACGT25146060TCTCAATGTCCCCTGTCCACCTGCGCAACACATTAGCAATGTGGAAGAGC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:25630622-25630641
CAAAACACTTTGCATCCAAGATCCCAACGT25630622TCTCAATGTCCCCTGTCCACCTGCGCAACACATTAGCAATGTGGAAGAGC
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:25219552-25219571
CAAAACACTTTGCATCCAAGATCCCAACGT25219552TCTCAATGTCCCCTGTCCACCTGCGCAACACATTGGCAATGTGGAAGAGC
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: IV.
OX377201.1:85913644-85913663
TCAAAGCTGCATCCGCTGATACACATTTCA85913644TCTCAATGTCCCCTGTCCACCCGTTGTTTTTTCTTTAACCCATTCACGAC
Peromyscus eremicus genome assembly, chromosome: X.
OX460417.1:33402168-33402187
ATCCAATCAATGAGAGAGAAGAGAGATTCT33402168GTGGACAGGGGACATTGAGATCATGATGGGAAAACCTGCAGAGATGACCA
Peromyscus eremicus genome assembly, chromosome: X.
OX460489.1:40229557-40229576
ATCCAATCAATGAGAGAGAAGAGAGATTCT40229557GTGGACAGGGGACATTGAGATCATGATGGGAAAACCTGCAGAGATGACCA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:28131224-28131243
GCTCTTCCACATTGCCAATGTGTTGCGCAG28131224GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:27631011-27631030
GCTCTTCCACATTGCCAATGTGTTGCGCAG27631011GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:27904711-27904730
GCTCTTCCACATTGCCAATGTGTTGCGCAG27904711GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:27645273-27645292
GCTCTTCCACATTGCCAATGTGTTGCGCAG27645273GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:28591080-28591099
GCTCTTCCACATTGCCAATGTGTTGCGCAG28591080GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:27466219-27466238
GCTCTTCCACATTGCCAATGTGTTGCGCAG27466219GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:26599165-26599184
GCTCTTCCACATTGCCAATGTGTTGCGCAG26599165GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: II.
OX377202.1:8781262-8781281
GTCGTGAATGGGTTAAAGAAAAAACAACGG8781262GTGGACAGGGGACATTGAGATGAAATGTGTATCAGCGGATGCAGCTTTGA
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: X.
OX377206.1:79556457-79556476
GTCGTGAATGGGTTAAAGAAAAAACAACGG79556457GTGGACAGGGGACATTGAGATGAAATGTGTATCAGCGGATGCAGCTTTGA

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