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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 03:20:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RCRBS38TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBS38, mRNA sequence.
EG665933.1:667-688
CATATATAGGTATTTGTTATGCTTCATGTT667TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRA846TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRA846, mRNA sequence.
EG669850.1:595-616
CATATATAGGTATTTGTTATGCTTCATGTT595TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRCT07TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCT07, mRNA sequence.
EG672296.1:663-684
CATATATAGGTATTTGTTATGCTTCATGTT663TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRD108TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRD108, mRNA sequence.
EG673663.1:673-694
CATATATAGGTATTTGTTATGCTTCATGTT673TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRD925TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRD925, mRNA sequence.
EG675127.1:667-688
CATATATAGGTATTTGTTATGCTTCATGTT667TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRDN52TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDN52, mRNA sequence.
EG677607.1:45-66
ATATATAGGTATTTTGTTATGCTTCATGTT45TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRDY09TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDY09, mRNA sequence.
EG679463.1:673-694
CATATATAGGTATTTGTTATGCTTCATGTT673TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRE169TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRE169, mRNA sequence.
EG680142.1:662-683
CATATATAGGTATTTGTTATGCTTCATGTT662TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRE982TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRE982, mRNA sequence.
EG681659.1:677-698
CATATATAGGTATTTGTTATGCTTCATGTT677TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRA365TPB Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRA365, mRNA sequence.
EG686206.1:55-76
CATATATAGGTATTTGTTATGCTTCATGTT55TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRBF49TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBF49, mRNA sequence.
EG688353.1:248-269
CATATATAGGTATTTGTTATGCTTCATGTT248TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT
RCRBF73TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBF73, mRNA sequence.
EG688397.1:674-695
CATATATAGGTATTTGTTATGCTTCATGTT674TGATGCTAATGGCCTACTCAGAAAGATGTCTTCTATTATCTCTGTGCTTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTGAGTAGGCCATTAGCATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGAGTAGGCCATTAGCATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGAGTAGGCCATTAGCATCA&k=0&no_gap=0&offset=0&limit=50
0.841 | 0.750 | search_minus_done; http://172.18.8.135:50400/match?q=TGATGCTAATGGCCTACTCAGA&k=0&no_gap=0&offset=0&limit=50
0.850 | 0.008 | cgi_end;

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