GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:58:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Microcaecilia unicolor genome assembly, chromosome: 5.
LR594636.1:42201362-42201381
GTTGCTGTGGGGAACCCGCTGCGGTCGTCT42201362TCTTGCTTCTTTTCTTCCGCGAAGTTGTGGCTGCTTCCGTGGGGGCGGGC
Microcaecilia unicolor genome assembly, chromosome: 6.
LR594637.1:215611775-215611794
ATTGCTGCGGGGGACCCGCTGCAGTCGTCT215611775TCTTGCTTCTTTTCTTCCGCGAAGTTGTGGCTGCTTCTGTGGGGGAGGGC
Microcaecilia unicolor genome assembly, chromosome: 8.
LR594639.1:174803337-174803356
ATTGCTGCGGGGGACCCGCTGCGGTCGTCT174803337TCTTGCTTCTTTTCTTCCGCGAAGTGGAGGCTGCTTCTGTGGGGGCGGGC
Microcaecilia unicolor genome assembly, chromosome: 10.
LR594641.1:130923143-130923162
ATTGCTGCGGGGGACCCGCTGCGGTCGTCT130923143TCTTGCTTCTTTTCTTCCGCAAAGTTGATGCCGCTTCTGTGGGGGCGGGC
Microcaecilia unicolor genome assembly, chromosome: 13.
LR594644.1:17328010-17328029
ATTGCTGCAGGGGACCCGCTGCGGTCGTCT17328010TCTTGCTTCTTTTCTTCCGCAAAGTTGTGGCTGCTTCCGTGGGGGCGGGC
Canna indica chromosome 6.
CP136895.1:9360246-9360265
TCTTTGAAAACTATACCTTTTTCTCTCACA9360246TCTTGCTTCTTTTCTTCCGCATGATACTTTCCTTTTCTCAATCTTTCATC
Thermobacillus composti KWC4, complete genome.
CP003255.1:1518181-1518200
CGATGACGACGGCCGCGTAGATGAAAGGCA1518181TCTTGCTTCTTTTCTTCCGCATGGGTTGACGCTGAACCTCCAATAATCCG
Thysanoteuthis rhombus genome assembly, chromosome: 40.
OY735237.1:13480943-13480962
AGCCCATAAAGAATAGAAGTACAGGTTTCC13480943TCTTGCTTCTTTTCTTCCGCCATTTCTGCTTTTGTTTTTATCATGCCACG
Microcaecilia unicolor genome assembly, chromosome: 3.
LR594634.1:288457958-288457977
GCCCGCCCCCACGGAAGCAGCCACAACTTC288457958GCGGAAGAAAAGAAGCAAGAAGACGACTGCAGCGGGTTCCCCGCAGCAAC
Triticum monococcum genome assembly, chromosome: 5A.
OY737854.1:67593261-67593280
GACTCGCCTCGGGTAACCATGTACACGGAA67593261GCGGAAGAAAAGAAGCAAGAGAAGACGGCGTCGACCTGCTGGAAGAAGGC
Triticum monococcum genome assembly, chromosome: 5A.
OY737862.1:63846274-63846293
GACTCGCCTTGGGTAACCATGTACACGGAA63846274GCGGAAGAAAAGAAGCAAGAGAAGACGGCGTCGACCTGCTGGAAGAAGGC
Bacterium SCSIO 12741 chromosome, complete genome.
CP073749.1:2930657-2930676
TTTTTGCGCACCCCGTTGGAATGACTATTC2930657GCGGAAGAAAAGAAGCAAGATTATGTTTGAGAGTTTATCGGATAGATTAG
Bombus campestris genome assembly, chromosome: 2.
HG995127.1:8925808-8925827
AAATATAATGAGGAAGAAATGAAAAGAAGA8925808GCGGAAGAAAAGAAGCAAGAAGAAGAAGCAGAAATAGCAGCTGCACAGTT
Cantharis rustica genome assembly, chromosome: 2.
OU426878.1:61885787-61885806
GAACAACTGGAAGTTTTAGATGAGTCGGGG61885787GCGGAAGAAAAGAAGCAAGACTCTAGCGAAATGGACACCTAAAACAAAAA
Galeruca laticollis genome assembly, chromosome: 5.
OY998179.1:65874384-65874403
GAGAAGATTGAGCGGTGCGGGCTGGAAGTG65874384GCGGAAGAAAAGAAGCAAGACGAGGGAAGTGGGGGTGATGGTGAAAGGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTTGCTTCTTTTCTTCCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTGCTTCTTTTCTTCCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTGCTTCTTTTCTTCCGC&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=GCGGAAGAAAAGAAGCAAGA&k=0&no_gap=0&offset=0&limit=42
0.155 | 0.005 | cgi_end;

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