GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 11:28:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus DNA, clone:LjT57o11_not.
AG263450.1:495-514
ATAAATATATATATATATATATATATATAT495TGAAAATTCGATCGAAGAGACTTAACTAAATTCTCATGTACTAAATGATA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:1192865-1192884
ATATATATATATATATATATATATATATAT1192865TGAAAATTCGATCGAAGAGACTTAACTAAATTCTCATGTACTAAATGATA
Ischnura elegans genome assembly, chromosome: 2.
OV121101.1:125658001-125658020
TTTTATTTAATTCACGAAGCTGTAACTCGA125658001TGAAAATTCGATCGAAGAGACCCTTGAATATTGACTGTGCGGGGAAACAA
Lotus japonicus genomic DNA, chromosome 6, clone: LjB23G22, BM1714.
AP010555.1:8354-8373
TATCATTTAGTACATGAGAATTTAGTTAAG8354TCTCTTCGATCGAATTTTCAATATATATATATATATATATATATATTTAT
Lotus japonicus genomic DNA, chromosome 6, clone: LjB02L14, BM1999.
AP010556.1:41047-41066
TATCATTTAGTACATGAGAATTTAGTTAAG41047TCTCTTCGATCGAATTTTCAATATATATATATATATATATATATATTTAT
Vibrio sp. SNU_ST1 chromosome 1, complete sequence.
CP130748.1:606442-606461
ACTCTTGCAATTGGTTAACGATGTTTGATG606442TCTCTTCGATCGAATTTTCAACTTTTTGTGATATATCATCTGATGCATCG
Netelia virgata genome assembly, chromosome: 6.
OX637868.1:3581682-3581701
AAAGAACAAACAAATTTTTGCACGCGAAAC3581682TCTCTTCGATCGAATTTTCATCGATTTCTCGAGATCCAGAAAAAAAAACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAAAATTCGATCGAAGAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAAAATTCGATCGAAGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=TGAAAATTCGATCGAAGAGA&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCTTCGATCGAATTTTCA&k=0&no_gap=0&offset=0&limit=47
0.132 | 0.003 | cgi_end;

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