GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 02:03:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

odh52d03.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH959707.1:343-362
CATTCTTGTTTCTTGATTCTAACTGCATCT343GCTTCGCTCTTTGTGATTCACTCAGCTGAAGAAGCATCTTATCACTGCTA
Brassica oleracea lysine-ketoglutarate reductase/saccharopine dehydrogenase gene, partial cds.
AF191667.1:1331-1350
CATTCTTGTTTATTGATTCTAAGTCACTCT1331GCTTCGCTCTTTGTGATTCACTCAGCTGAAGAAGCATCTTATCACTGCTA
Brassica napus genome assembly, chromosome: C01.
HG994365.1:2898517-2898536
CATTCTTGTTTATTGATTCTAAGTCACTCT2898517GCTTCGCTCTTTGTGATTCACTCAGCTGAAGAAGCATCTTATCACTGCTA
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:2845552-2845571
CATTCTTGTTTATTGATTCTAAGTCACTCT2845552GCTTCGCTCTTTGTGATTCACTCAGCTGAAGAAGCATCTTATCACTGCTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAATCACAAAGAGCGAAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAATCACAAAGAGCGAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=TGAATCACAAAGAGCGAAGC&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTCGCTCTTTGTGATTCA&k=0&no_gap=0&offset=0&limit=50
0.153 | 0.003 | cgi_end;

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