GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:52:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC24b09_034, unspecified EST.
FY462399.1:22-41
GAGTCCGTCCTCCTCGTAATA22CTCACCGGATCGATAACTCATCACATCACACAGTCTCTCTCTCTCTCTCT
Trifolium repens mRNA, clone: WCC39m16_055, unspecified EST.
FY468022.1:17-36
CCGTCCTCCTCGTATA17CTCACCGGATCGATAACTCATCACATCACACAGTCTCTCTCTCTCTCTCT
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:1269135-1269154
ACGAGTGACGAGTCCGTCCTCCTCGTAATA1269135CTCACCGGATCGATAACTCATCACATCTCTCTCTCTCTCTCTCTCTCTCT
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:1117176-1117195
ACGAGTGACGAGTCCGTCCTCCTCGTAATA1117176CTCACCGGATCGATAACTCATCACACACACACACACAGAGCTTCTCTCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAGTTATCGATCCGGTGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGTTATCGATCCGGTGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.088 | 0.079 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGTTATCGATCCGGTGAG&k=0&no_gap=0&offset=0&limit=50
0.265 | 0.177 | search_minus_done; http://172.18.8.135:50400/match?q=CTCACCGGATCGATAACTCA&k=0&no_gap=0&offset=0&limit=50
0.268 | 0.003 | cgi_end;

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