GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:27:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:2937306-2937325
TTGTTTATGGAACAAAGACACCCACAGATT2937306TGAGTTTGGCGTCTCTCCTTTGTGTTGTTTCTGTTTTACTTTTCTGAAAA
Trifolium repens isolate ACLI19 chromosome 06_Pall.
CP125847.1:2503800-2503819
TTGTTTTTGGAACAAAGACACCCACAGATT2503800TGAGTTTGGCGTCTCTCCTTTGTGTTGTTCTATGAAGCCCCGATACGGGA
Kwoniella sp. CBS 9459 chromosome 1.
CP144065.1:8670390-8670409
GAGGCGGTTGGGGTAGTGAGCGCGACATGT8670390TGAGTTTGGCGTCTCTCCTTCCGCTGAATCAGAAGCCTCGAAGAAAGAGA
Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:3277186-3277205
TTGTTTTTGGAACAAAGACACCCACAGATT3277186TGAGTTTGGCGTCTCTCCTTTGTGTTGTTTCTGTTTTACTTTTCTGAAAA
Sepioteuthis lessoniana genome assembly, chromosome: 17.
OY757920.1:77805401-77805420
ACTGATGAAACTTCAGTTCTGGAGATTCGG77805401TGAGTTTGGCGTCTCTCCTTCGTTGTCATTACCCCCAGGTCGACTCTGAC
Trifolium repens mRNA, clone: WCC35k16_061, unspecified EST.
FY466526.1:18-37
TAAACAGAAACAACACA18AAGGAGAGACGCCAAACTCAAATCTGTGGGTGTCTTTGTTCCAAAAACAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAGTTTGGCGTCTCTCCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGTTTGGCGTCTCTCCTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGTTTGGCGTCTCTCCTT&k=0&no_gap=0&offset=0&limit=50
0.202 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=AAGGAGAGACGCCAAACTCA&k=0&no_gap=0&offset=0&limit=45
0.202 | 0.001 | cgi_end;

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