GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-13 03:30:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EG-E11_002_A04 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_002_A04, mRNA sequence.
JK668591.1:289-306
AGAGAGAGGAGGGGGGGAGGGAGAGATCGA289TGATCGTAGGGGTCGCGTCCCCGCGTA
EG-E11_002_G07 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_002_G07, mRNA sequence.
JK668664.1:289-306
AGAGAGAGGAGGGGGGGAGGGAGAGATCGA289TGATCGTAGGGGTCGCGTCCCCGCGTA
Wolffia australiana isolate 7733 chromosome 12.
CP092611.1:11666229-11666246
GCAGGACGAAGAATCTGAAGGCCTGAATGC11666229TGATCGTAGGGGTCGCGTGGGCGAATGGCTGCGCACGGCTGCCGCGTG
Geotrupes spiniger genome assembly, chromosome: 4.
OY390734.1:5988631-5988648
TGTTCGATCGTCAATATCTTCGAGTCATAA5988631TGATCGTAGGGGTCGCGTGTTTCCTGTTGGAATATGCTGCCAGTATAA
pOP-EO02713_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02713 5', mRNA sequence.
EY413614.1:10-27
CCCGCTTTT10ACGCGACCCCTACGATCATCGATCTCTCCCTCCCCCCCTCCTCTCTCT
Microbacterium foliorum strain 122 chromosome, partial genome.
CP019892.1:964628-964645
CCTTGCCGATGCGGGTGCGTGTGAGGAAGA964628ACGCGACCCCTACGATCACGACGATGCTGACGACGATTCCGATCAGGT
Nomada fucata genome assembly, chromosome: 4.
OX411278.1:8156701-8156718
TGTACGGGCAGATTAACGTCATTATTAATT8156701ACGCGACCCCTACGATCAAACTTTCCCCTCGTTTATCTTAATTAATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGATCGTAGGGGTCGCGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATCGTAGGGGTCGCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.294 | 0.285 | search_plus_done; http://172.18.8.135:50400/match?q=TGATCGTAGGGGTCGCGT&k=0&no_gap=0&offset=0&limit=50
0.378 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=ACGCGACCCCTACGATCA&k=0&no_gap=0&offset=0&limit=46
0.380 | 0.002 | cgi_end;

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