GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 00:04:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Musa acuminata subsp. malaccensis isolate AA chromosome 7.
CP126376.1:33137532-33137551
AAATGTTCAAGTTTATTATGACCAGAATTC33137532TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa acuminata subsp. malaccensis isolate AA chromosome 18.
CP126387.1:32966984-32967003
AAATGTTCAAGTTTATTATGACCAGAATTC32966984TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A07.
HG996473.1:34033423-34033442
AATTGTTCAAGTTTATTATGACCAGAATTC34033423TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa schizocarpa genome assembly, chromosome: S07.
LS990920.1:37589644-37589663
AAATGTTCAAGTTTATTATGACCAGAATTC37589644TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Sympetrum striolatum genome assembly, chromosome: 11.
OX388351.1:48755717-48755736
AATTCATTGGATTGATAGATTAAATCACTG48755717TGATGAGGTGCAGCTGTAGGTTTACCTAATCTATGCATGTACTTATGACA
Musa troglodytarum cultivar karat chromosome 7.
CP097509.1:9015828-9015847
CAATCTATAACACATACCATTCTCATGATG9015828CCTACAGCTGCACCTCATCAGAATTCTGGTCATAATAAACTTGAACATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGATGAGGTGCAGCTGTAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATGAGGTGCAGCTGTAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=TGATGAGGTGCAGCTGTAGG&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=CCTACAGCTGCACCTCATCA&k=0&no_gap=0&offset=0&limit=45
0.141 | 0.001 | cgi_end;

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