GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 15:53:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RCG01882.
DE213617.1:11-30
CAGTCGAATT11TGCACCCATCAAGTGTTTGTGAAAATGCCTAAACCTAAATCCACCGATGC
Trifolium pratense DNA, clone:RCG01985.
DE213702.1:11-30
CAGTCGAATT11TGCACCCATCAAGTGTTTGTGAAAATGCCTAAACCTAAATCCACCGATGC
Trifolium pratense DNA, clone:RCG02252.
DE213912.1:11-30
CAGTCGAATT11TGCACCCATCAAGTGTTTGTGGAAATGCCTAAACCTAAATCCACCGATGC
Bufo bufo genome assembly, chromosome: 10.
LR991676.1:54407136-54407155
GGATTACTGAGATTTTTATTGAAAGCATCA54407136ACAAACACTTGATGGGTGCAAAGTCACTAAACACAGAAATTAGGTCATCG
Trifolium pratense DNA, clone:RCG02748.
DE214305.1:170-189
GCATCGGTGGATTTAGGTTTAGGCATTTTC170ACAAACACTTGATGGGTGCAAATTCGACTG
Trifolium pratense DNA, clone:RCG03929.
DE215271.1:170-189
GCATCGGTGGATTTAGGTTTAGGCATTTTC170ACAAACACTTGATGGGTGCAAATTCGACTG
Trifolium pratense DNA, clone:RCG01068.
DE246714.1:170-189
GCATCGGTGGATTTAGGTTTAGGCATTTTC170ACAAACACTTGATGGGTGCAAATTCGACTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCACCCATCAAGTGTTTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCACCCATCAAGTGTTTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.140 | 0.131 | search_plus_done; http://172.18.8.135:50400/match?q=TGCACCCATCAAGTGTTTGT&k=0&no_gap=0&offset=0&limit=50
0.239 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=ACAAACACTTGATGGGTGCA&k=0&no_gap=0&offset=0&limit=47
0.242 | 0.003 | cgi_end;

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