GGGenome | Results

2025-04-11 02:15:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Acomys russatus genome assembly, chromosome: 30.
LR877241.1:1418704-1418723

TGAGAGAAATAATTAACTCTTAAAGTCAAA1418704TGCATGAGAGCTGTTGCAGAAGCCAGTCCTGACTGAAACATGCATGACAC

020813KAUA999077HT (KAUA) Actinidia chinensis CK51-05 petal Actinidia chinensis cDNA clone KAUAA99907, mRNA sequence.
FG485185.1:182-201

TTCAAGGACGACGGCTATAACGTTGCAAAG182TGCATGAGAGCTGTTGCAGAGCCCTTGCTTGCTAGTCACTTCGGGGAGGC

021106KAUB001468HT (KAUB) Actinidia chinensis CK51-05 petal Actinidia chinensis cDNA clone KAUBB00146, mRNA sequence.
FG486474.1:138-157

TTCAAGGACGACGGCTATAACGTTGCAAAG138TGCATGAGAGCTGTTGCAGAGCCCTTGCTTGCTAGTCACTTCGGGGAGGC

Actinidia deliciosa salicylic acid methyltransferase mRNA, complete cds.
OL661269.1:940-959

TTCAAGGACGACGGCTATAATGTTGCAAAG940TGCATGAGAGCTGTTGCAGAGCCCTTGCTTGCTAGTCACTTCGGGGAGGC

Volucella zonaria genome assembly, chromosome: 5.
OZ014534.1:115204648-115204667

ACGAAAGGATGGAATTAATACTAAAGGCCC115204648TGCATGAGAGCTGTTGCAGACCAAACTCTGATAGAAAATTTTTCGAGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.278 | 0.269 | search_plus_done; http://172.18.8.135:50400/match?q=TGCATGAGAGCTGTTGCAGA&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGCAACAGCTCTCATGCA&k=0&no_gap=0&offset=0&limit=45
0.305 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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