GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:03:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

GM830007B20H04 Gm-r1083 Glycine max cDNA clone Gm-r1083-2672 3', mRNA sequence.
BI969302.1:278-302
ACTGAATCCTTCCCAGGCTTGATTCCAAGT278TGCCTAAATATGATGTGATTTGGGCTCCAATCAGATGTGTCCAAATGACAAATGC
gmrtDrNS01_25-B_M13R_H03_017.s3 Water stressed 48h segment 1 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX705382.1:439-463
ACTGAATCCTTCCCAGGCTTGATTCCAAGT439TGCCTAAATATGATGTGATTTGGGCTCCAATCAGATGTGTCCAAATGACAAATGC
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:9130238-9130262
ACTGAATCCTTCCCAGGCTTGATTCCAAGT9130238TGCCTAAATATGATGTGATTTGGGCTCCAATCAGATGTGTCCAAATGACAAATGC
Sequence 24431 from patent US 9029636.
HK933494.1:1415-1439
GCATTTGTCATTTGGACACATCTGATTGGA1415GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
gmrhRww3-15_A07_1_063 Soybean root hair subtracted cDNA library gmrhRww3 Glycine max cDNA, mRNA sequence.
CF920487.1:6-30
GCGGG6GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
GLNAX44TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV280789.1:350-374
GCATTTGTCATTTGGACACATCTGATTGGA350GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
GLNAZ73TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV280990.1:552-576
GCATTTGTCATTTGGACACATCTGATTGGA552GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
GLNBE72TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV282279.1:350-374
GCATTTGTCATTTGGACACATCTGATTGGA350GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
abe73h11.y1 Soybean methylation filtered genomic library Glycine max genomic, genomic survey sequence.
CL871202.1:263-287
GCATTTGTCATTTGGACACATCTGATTGGA263GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT
Soybean clone JCVI-FLGm-10N5 unknown mRNA.
BT092330.1:552-576
GCATTTGTCATTTGGACACATCTGATTGGA552GCCCAAATCACATCATATTTAGGCAACTTGGAATCAAGCCTGGGAAGGATTCAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCCTAAATATGATGTGATTTGGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCTAAATATGATGTGATTTGGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.139 | 0.130 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCTAAATATGATGTGATTTGGGC&k=0&no_gap=0&offset=0&limit=50
0.371 | 0.231 | search_minus_done; http://172.18.8.135:50400/match?q=GCCCAAATCACATCATATTTAGGCA&k=0&no_gap=0&offset=0&limit=47
0.375 | 0.005 | cgi_end;

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