GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-29 21:02:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
AP015035.1:42319167-42319186
TCAACGAAAGTGGTGATGATGATGATGATA42319167TGCCTTGGTTTTGTGTAGCAATAGAGAGGGAAAAATAGATATGTTTGGTG
Hypena proboscidalis genome assembly, chromosome: 16.
LR990142.1:1329519-1329538
ATTACTTGAGTACATCCCTGTGTTTGTATG1329519TGCCTTGGTTTTGTGTAGCACCCGCGACTGCCTCGCTCTCTAGTTTAATG
Rhinatrema bivittatum genome assembly, chromosome: 14.
LR584400.1:73309854-73309873
CAGTGTTGGGCAAGCAATTTAGCTTACTAC73309854TGCTACACAAAACCAAGGCAAATCACTCTTAAAGTAAAATGAAGAGGAGG
Vigna angularis mRNA, clone: VES03L03.
HX943476.1:11-30
CCCTCTCTAT11TGCTACACAAAACCAAGGCATATCATCATCATCATCACCACTTTCGTTGA
Vigna angularis mRNA, clone: VES16A04.
HX948124.1:11-30
CCCTCTCTAT11TGCTACACAAAACCAAGGCATATCATCATCATCATCACCACTTTCGTTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCCTTGGTTTTGTGTAGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCTTGGTTTTGTGTAGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCTTGGTTTTGTGTAGCA&k=0&no_gap=0&offset=0&limit=50
0.311 | 0.205 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTACACAAAACCAAGGCA&k=0&no_gap=0&offset=0&limit=48
0.313 | 0.002 | cgi_end;

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