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2025-04-14 01:07:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Dianthus caryophyllus mRNA, clone: CES05P03, 5' end sequence.
FY384344.1:148-167

TTTTAACCTTATTATTCAATTCGTTGAAGA148GTTCAAGGGCATAAGGAGCAATTTTCGGCAAGTTACATTCTTGAACTCGC

Dianthus caryophyllus mRNA, clone: CES26_N10, 5' end sequence.
FY392225.1:148-167

TTTTAACCTTATTATTCAATTCGTTGAAGA148GTTCAAGGGCATAAGGAGCAATTTTCGGCAAGTTACATTCTTGAACTCGC

TSA: Dianthus caryophyllus mRNA, contig: CAK09.404.C1.
FX297293.1:418-437

TTTTAACCTTATTATTCAATTCGTTGAAGA418GTTCAAGGGCATAAGGAGCAATTTTCGGCAAGTTACATTCTTGAACTCGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=TGCTCCTTATGCCCTTGAAC&k=0&no_gap=0&offset=0&limit=50
0.266 | 0.167 | search_minus_done; http://172.18.8.135:50400/match?q=GTTCAAGGGCATAAGGAGCA&k=0&no_gap=0&offset=0&limit=50
0.268 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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