GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 09:08:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nephrotoma flavescens genome assembly, chromosome: 3.
OW052222.1:237861641-237861662
TTGGTTGCACACCTGGTCAAGCAAGGTTGA237861641TGGACCAGATGAAAATTTTGTTGATCAATCAAAGAACACAGAATTTTCAAGA
Hippopus hippopus genome assembly, chromosome: 1.
OX328096.1:1646344-1646365
CCAGTATGTTACCGACTGAGCTATCTGGGC1646344TGGACCAGATGAAAATTTTGTTGTTTGGAAAAGAGTTAAAAATGACTAACTA
Fragum fragum genome assembly, chromosome: 2.
OX336366.1:74824098-74824119
AAAGAATGTCTTCTGCAACTTCTTTCAATT74824098TGGACCAGATGAAAATTTTGTTGTCTGGTAATGGATTAAATGATGGTATTGT
Algoriphagus sp. NG3 chromosome, complete genome.
CP139421.1:577082-577103
GACTTTAGAATTAGTACAAAAAATATAAGC577082AACAAAATTTTCATCTGGTCCACTGACCTTACGGTGTCACGCAACATCAATA
Nephrotoma flavescens genome assembly, chromosome: 2.
OW052221.1:275079534-275079555
TCAATGTTTTCTCGATTTCATTGATTGATC275079534AACAAAATTTTCATCTGGTCCATCAAAACTGCTGACTGGTAACCATCTGTGC
Tridacna crocea genome assembly, chromosome: 1.
OX031056.1:18053982-18054003
ACCTGTGCTTCACTTAATTCTTCACCACAC18053982AACAAAATTTTCATCTGGTCCAAATAGTAGGCATTTGTAGACGAAAAAATAT
Tridacna gigas genome assembly, chromosome: 2.
OX244029.2:53527354-53527375
ATATGGTAAAGAATTAACTCCTTACCAAAC53527354AACAAAATTTTCATCTGGTCCAAATCCAAATGGTTCAAATAGTGGGATATGT
Fragum fragum genome assembly, chromosome: 13.
OX336377.1:54979499-54979520
CAAACTCTTGAGCTTAAGTATATACCAGAC54979499AACAAAATTTTCATCTGGTCCAAATTGAAAGAGGCTGCTGACAACAATTGCA
Tridacna derasa genome assembly, chromosome: 1.
OY723414.1:79355334-79355355
TAGTTAGTCATTTTTAACTCTTTTCCAAAC79355334AACAAAATTTTCATCTGGTCCAGCCCAGATAGCTCAGTCGGTAACATACTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGACCAGATGAAAATTTTGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGACCAGATGAAAATTTTGTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.088 | 0.079 | search_plus_done; http://172.18.8.135:50400/match?q=TGGACCAGATGAAAATTTTGTT&k=0&no_gap=0&offset=0&limit=50
0.102 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=AACAAAATTTTCATCTGGTCCA&k=0&no_gap=0&offset=0&limit=47
0.106 | 0.004 | cgi_end;

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