GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 12:36:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Musa acuminata subsp. malaccensis isolate AA chromosome 1.
CP126370.1:5233827-5233846
CAAAAGTCTACTTACCAGCATAAAACTCGA5233827TGGACCTTGCACATGAGAAACTTGCATCCACTTCTTATATCTCCAATGAA
Musa acuminata subsp. malaccensis isolate AA chromosome 12.
CP126381.1:5200133-5200152
CAAAAGTCTACTTACCAGCATAAAACTCGA5200133TGGACCTTGCACATGAGAAACTTGCATCCACTTCTTATATCTCCAATGAA
Eilema caniola genome assembly, chromosome: Z.
OX421460.1:39131926-39131945
AATAACATGTTTCAAGCTGACTGTGCCCTT39131926TGGACCTTGCACATGAGAAAATGCTTTTAAGGTTACAAATAAATACGTTC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A04.
HG996469.1:39421803-39421822
TTCATTGGAGATATAAGAAGTGGATGCAAG39421803TTTCTCATGTGCAAGGTCCATCGAGTTTTATGCTGGTAAGTAGACTTTTG
Musa schizocarpa genome assembly, chromosome: S04.
LS990918.1:43983148-43983167
TTCATTGGAGATATAAGAAGTGGATGCAAG43983148TTTCTCATGTGCAAGGTCCATCGAGTTTTATGCTGGTAAGTAGACTTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGACCTTGCACATGAGAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGACCTTGCACATGAGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=TGGACCTTGCACATGAGAAA&k=0&no_gap=0&offset=0&limit=50
0.113 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCTCATGTGCAAGGTCCA&k=0&no_gap=0&offset=0&limit=47
0.114 | 0.001 | cgi_end;

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