GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 00:07:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Echeneis naucrates genome assembly, chromosome: 14.
LR584055.1:8468835-8468854
GCAGGAGAGCAGGAGCACTGGGGATAAATA8468835TGGAGAAGTGTTTTGATTACCTATGAGCCTGTTCAGCTCTGTGTTGGTTA
Pelobates cultripes genome assembly, chromosome: 07.
OW240918.1:3809425-3809444
GTGATTAAGGGAAAAGCAGATATCCTGGCT3809425GTAATCAAAACACTTCTCCAAAATAAAAGAATACATGTATTAATTAATAT
Xyrichtys novacula genome assembly, chromosome: 22.
OY660885.1:4255177-4255196
GTTTGAACACTTGAGTGAAGTTTGCTGAAA4255177GTAATCAAAACACTTCTCCACTCAATATCGATTTATGCTCCACTCTAAAT
Pinus sylvestris EST, clone WZ0APSCA9YE21NM1.
HE627643.1:29-48
AAGTGATCAAAACACCACCCCATTAGAT29GTAATCAAAACACTTCTCCAAATTGAGAATTATTAACCGTCCAACCCAGA
Harmothoe impar genome assembly, chromosome: 11.
OX381714.1:61536456-61536475
TTTTATATAGCTCGCCCTGCCATTATGCAT61536456GTAATCAAAACACTTCTCCACAGAATGCATTTTTTAAAATTAGTGCAAAG
Beris chalybata genome assembly, chromosome: 3.
OX421896.1:29391892-29391911
GAAGAAACAATATCAACACCATTATCCAAA29391892GTAATCAAAACACTTCTCCATCCAGCAGCCATTGTATCTTATAATGAAAA
Beris morrisii genome assembly, chromosome: 2.
OX638311.1:47883366-47883385
GAAGAAACAATATCAACACCATTACCCAAA47883366GTAATCAAAACACTTCTCCATCCAGCAGCCATTCTATCTTATAATGAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGAGAAGTGTTTTGATTAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAGAAGTGTTTTGATTAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAGAAGTGTTTTGATTAC&k=0&no_gap=0&offset=0&limit=50
0.237 | 0.127 | search_minus_done; http://172.18.8.135:50400/match?q=GTAATCAAAACACTTCTCCA&k=0&no_gap=0&offset=0&limit=49
0.241 | 0.004 | cgi_end;

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