GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 03:12:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:9243385-9243404
GAGTTACGTAGAAGAGTGTGCCATGGCATA9243385TGGATCATTTTTGTCATGCCGCATGTTACTATATCTGTTCCAATTTTTGG
Arachis hypogaea DNA, clone: AHGS41B23.
DH961683.1:204-223
CCAAAAATTGGAACAGATATAGTAACATGC204GGCATGACAAAAATGATCCATATGCCATGGCACACTCTTCTACGTAACTC
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:1573430-1573449
CCAAAAATTGGAACAGATATAGTAACATGC1573430GGCATGACAAAAATGATCCATATGCCATGGCACACTCTTCTACGTAACTC
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:1527775-1527794
CCAAAAATTGGAACAGATATAGTAACATGC1527775GGCATGACAAAAATGATCCATATGCCATGGCACACTCTTCTACGTAACTC
Pyrausta despicata genome assembly, chromosome: 5.
OY992849.1:8752340-8752359
AAACTCTTACGATAGAAACGGCAAAGAAAT8752340GGCATGACAAAAATGATCCAGTAAGGTTAATAAGTTAAGGTAAGAATAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGATCATTTTTGTCATGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGATCATTTTTGTCATGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.122 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=TGGATCATTTTTGTCATGCC&k=0&no_gap=0&offset=0&limit=50
0.170 | 0.048 | search_minus_done; http://172.18.8.135:50400/match?q=GGCATGACAAAAATGATCCA&k=0&no_gap=0&offset=0&limit=49
0.172 | 0.003 | cgi_end;

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