GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 03:17:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig42143 mRNA sequence.
JW092387.1:974-993
GGTAGTGATACTAATAAGGTCTACACACAC974TCTATCATCCCCAGATCCCACTTGTGGGATTTCAC
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:167011764-167011783
GGTAGTGATACTAATAAGGTCTACACACAC167011764TCTATCATCCCCAGATCCCACTTGTGGGATTTCACTGGGTATGTTGTTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:167716980-167716999
GGTAGTGATACTAATAAGGTCTACACACAC167716980TCTATCATCCCCAGATCCCACTTGTGGGATTTCACTGGGTATGTTGTTGT
Vicia faba genome assembly, chromosome: 4.
OX451739.1:278127364-278127383
CCATGGGCCAACCACATCATCACCATCAGA278127364TCTATCATCCCCAGATCCCACGCCCCTGGAAACGCTTCCATACCATGGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGGGATCTGGGGATGATAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGGATCTGGGGATGATAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=TGGGATCTGGGGATGATAGA&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.039 | search_minus_done; http://172.18.8.135:50400/match?q=TCTATCATCCCCAGATCCCA&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.003 | cgi_end;

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