GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 22:57:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Apamea sordens genome assembly, chromosome: 8.
OX243993.1:17001907-17001926
GGCCTTCCTCTTCCTCTCCATTCAACAACA17001907TGTTCATATATTCATCACTCTTTTAGTCACATGCGTTTCGTCCCTTCTCA
Pyrus pyrifolia DNA, microsatellite marker, clone:NH014a.
AB061368.1:96-115
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA96GAGTGATGAATATATGAACATAAGGTGTATTGAGCCTGTTA
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:6453448-6453467
ATTACGCTATGAAAGAGAGAGAGAGAGAGA6453448GAGTGATGAATATATGAACATAAGGTGTATTGAGGCTGTTAACCAAACCC
Flavobacterium aestivum isolate IMCC34774 chromosome, complete genome.
CP113977.2:2259341-2259360
AATTTCGAACGAACTTTTAGGATATTCAAT2259341GAGTGATGAATATATGAACATGCCAATAACATTGGTATTGGTGCCAATTC
Crioceris asparagi genome assembly, chromosome: 6.
OY293831.1:17766983-17767002
TCTCTTATAAAATGATAACAACACCATGTT17766983GAGTGATGAATATATGAACATGAAGCATGACTGATATTTCCCTGGCTTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTTCATATATTCATCACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTCATATATTCATCACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.090 | 0.081 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTCATATATTCATCACTC&k=0&no_gap=0&offset=0&limit=50
0.103 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTGATGAATATATGAACA&k=0&no_gap=0&offset=0&limit=49
0.106 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).