GGGenome | Results

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2025-04-14 10:27:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 1.
CP093343.1:47711965-47711984

TATGTCCAATATTTCCTACTCTCGGTGGTG47711965ATCTCCCTTCAGCAGGAACAGTTGGCTGCAAGAATTGTTCAAGCTTATAA

Daucus carota isolate Kuroda chromosome 1.
CP125301.1:48979627-48979646

TATGTCCAATATTTCCTACTCTCGGTGGTG48979627ATCTCCCTTCAGCAGGAACAGTTGGCTGCAAGAATTGTTCAATCTTATAA

Sanghuangporus weigelae strain Si20 chromosome 3.
CP137320.1:1897029-1897048

TGACACTTCGGACTCGTCTATACCTTCTGC1897029ATCTCCCTTCAGCAGGAACACACCTCGTGTTCGGACCAGACGCTTGAACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.329 | 0.320 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTCCTGCTGAAGGGAGAT&k=0&no_gap=0&offset=0&limit=50
0.417 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTCCCTTCAGCAGGAACA&k=0&no_gap=0&offset=0&limit=50
0.419 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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