GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:33:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Solanum melongena mRNA, clone: CAL04N12, 5'end, expressed in callus at 3d after subculture.
FS010149.1:169-188
ATCATATACAAGAGCTTAAATAGTTCTATA169TGTTGTGGACACGGCTACTCTACTTTGACACGTTGCCCAAATTCCATTGC
Solanum melongena mRNA, clone: SmFL12H24, 5'end.
FS074563.1:169-188
ATCATATACAAGAGCTTAAATAGTTCTATA169TGTTGTGGACACGGCTACTCTACTTTGACACGTTGCCCAAATTCCATTGC
Dicrocoelium dendriticum genome assembly, scaffold: DDEL_scaffold0220611.
LK636334.1:29-48
CCTCATATCTTATCATATAGGACAGTAG29TGTTGTGGACACGGCTACTCCTATAGCAAATGTCTTTTGTGCATACTTTG
Setaria viridis cultivar ME034v chromosome 7.
CP050801.1:4109185-4109204
GTACAACCTCTGTAGAGTTAAAACCTATAC4109185GAGTAGCCGTGTCCACAACATTGGACGAGTTACGGCTTGGTCCCATAACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTTGTGGACACGGCTACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTGTGGACACGGCTACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.232 | 0.223 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTGTGGACACGGCTACTC&k=0&no_gap=0&offset=0&limit=50
0.247 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTAGCCGTGTCCACAACA&k=0&no_gap=0&offset=0&limit=47
0.248 | 0.001 | cgi_end;

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