GGGenome | Results

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2025-04-11 03:33:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Lotus japonicus genomic DNA, chromosome 6, clone: LjT13B14, TM1164.
AP007859.2:14429-14448

GGTGCTTACATCGGGTTTTGAGTTTGAGTG14429TTAAGTTCGGATCGATGAGCCCGTTGCCAACCCTAGTAAAAGTGTACCAG

Lotus japonicus genomic DNA, chromosome 6, clone: LjB69N14, BM1484.
AP008107.2:127915-127934

GGTGCTTACATCGGGTTTTGAGTTTGAGTG127915TTAAGTTCGGATCGATGAGCCCGTTGCCAACCCTAGTAAAAGTGTACCAG

Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:66253187-66253206

CTGGTACACTTTTACTAGGGTTGGCAACGG66253187GCTCATCGATCCGAACTTAACACTCAAACTCAAAACCCGATGTAAGCACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=TTAAGTTCGGATCGATGAGC&k=0&no_gap=0&offset=0&limit=50
0.131 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GCTCATCGATCCGAACTTAA&k=0&no_gap=0&offset=0&limit=48
0.132 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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