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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:07:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Felis catus Senzu DNA, chromosome: B2, American Shorthair breed.
AP023156.1:78342829-78342848
GTCTGGTATCCTGGAAATCACCCACCCACC78342829TTAGTCCCAAGCAAATTGGGATGGATGGTTACCCCAAAGACAACCAGACT
Balaenoptera acutorostrata genome assembly, chromosome: 17.
OX465367.1:58593752-58593771
CACTAAAAATCCCACATCCCAGGCACCTCC58593752TTAGTCCCAAGCAAATTGGGATATTTGGTCACCGCCCTCTTCTCTGAGGA
Stenella coeruleoalba genome assembly, chromosome: 17.
OX596402.1:57147416-57147435
CACTAAAAATCCCACATCCCAGGCACCTCC57147416TTAGTCCCAAGCAAATTGGGACAGTTGGTCACCGCCCTCTTCTCTGAGGA
SCACRZ3034F05.g RZ3 Saccharum hybrid cultivar SP80-3280 cDNA clone SCACRZ3034F05 5', mRNA sequence.
CA155068.1:384-403
CAAGAACAACAACAACAACAACAAAGCATT384TTAGTCCCAAGCAAATTGGGGTAGGCAATATGCAGTGCTCAATGTTATGA
id17e03.g1 WGS-ZmaysF (JM107 adapted methyl filtered) Zea mays genomic clone id17e03 5', genomic survey sequence.
BZ326939.1:24-43
ATCAACAACATCAACGAAGTCTT24TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACCCAACAAGATGT
PUEIX41TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa262H10, genomic survey sequence.
CC363306.1:750-769
AAATGCATCACATCACATCAACATAGCCTT750TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACTCAATAAGATGT
ZUAFE46TV ZM_3.0_4.0_KB Zea mays genomic clone ZMMBPa0050H19, genomic survey sequence.
CC988773.1:256-275
TTAACAGAAATGCAACAAGAAGAAAGCCTA256TTAGTCCCAAGCAAATTGGGGTAGACTAGAGTTAAAACCCAACGGAAACC
PUFNZ70TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa0693L20, genomic survey sequence.
CG135760.1:95-114
TTAACAGAAATGCAACAAGAAGAAAGCCTA95TTAGTCCCAAGCAAATTGGGGTAGACTAGAGTTAAAACCCAACGGAAACC
OGWMI52TH ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0617I07, genomic survey sequence.
CG226941.1:640-659
ACCACTCTTACCAACAACAAAGCAAAGCTT640TTAGTCCCAAGCAAATTGGGATAGGCTGAGAAAATGGCTACTATATTAGC
OG4AL06TC ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0805B12, genomic survey sequence.
CG378255.1:443-462
TTAACAGAAATGCAACAAGAAGAAAGCCTA443TTAGTCCCAAGCAAATTGGGGTAGACTAGAGTTAAAACCCAACGGAAACC
104_422_10942939_116_32322_076 Sorghum methylation-filtered library (LibID: 104) Sorghum bicolor genomic clone 10942939, genomic survey sequence.
CL196265.1:291-310
TGTTAAGTACACAGTTTTACCAACAAAGCC291TTAGTCCCAAGCAAATTGGGGTAGGGGGGATGAAAATCTAAAGTACCATG
104_628_11185178_116_37091_001 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone 11185178, genomic survey sequence.
CW202600.1:6-25
GCCTT6TTAGTCCCAAGCAAATTGGGACTTGGGGTAGGCTAGAGTTGAAACCCACC
fsbb001f117b23f0 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone fsbb001f117b23, genomic survey sequence.
CW416533.1:267-286
TGTTAAGTACACAGTTTTACCAACAAAGCC267TTAGTCCCAAGCAAATTGGGGTAGGGGGGATGAAAATCTAAAGTACCATG
SB_BBc24-J06.R SB_BBc Sorghum bicolor genomic 3', genomic survey sequence.
ER738318.1:736-755
TGTTAAGTACACAGTTTTACCAACAAAGCC736TTAGTCCCAAGCAAATTGGGGTAGGGGGGATGAAAATCTAAAGTACCATG
Striga asiatica UVA1 DNA, clone: SAS064C05, forward.
LB471648.1:509-528
ACACAACAACAACAACAACAACATAGCCTT509TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGATGAAACTCAAGAGAACCA
Zea mays cultivar B73 chromosome 5 clone ZMMBBb-529D19, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces.
AC183814.3:116567-116586
AAATGCATCACATCACATCAACATAGCCTT116567TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACTCAATAAGATGT
Zea mays cultivar B73 chromosome 7 clone CH201-42K21, *** SEQUENCING IN PROGRESS ***, 24 unordered pieces.
AC191639.5:99616-99635
ATGCAAAACCTACAACAACAACAAAGTCGT99616TTAGTCCCAAGCAAATTGGGACTTGGGGTAGGCAAGAGTAGAAACCCACC
Zea mays cultivar B73 chromosome 1 clone CH201-114K21, *** SEQUENCING IN PROGRESS ***, 36 unordered pieces.
AC191999.3:74041-74060
ACCACTCTTACCAACAACAAAGCAAAGCTT74041TTAGTCCCAAGCAAATTGGGATAGGCTGAGAAAATGGCTACTATATTAGC
Zea mays cultivar B73 chromosome 3 clone CH201-154J8, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces.
AC207427.4:160143-160162
ACCACTCTTACCAACAACAAAGCAAAGCTT160143TTAGTCCCAAGCAAATTGGGATAGGCTGAGAAAATGGCTACTATATTAGC
Zea mays cultivar B73 chromosome 8 clone CH201-46F24, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC209383.5:85633-85652
AATCATCAACATTAACATCAACATAGCCTT85633TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACTTGAAACCCAAC
Zea mays cultivar B73 chromosome 1 clone CH201-506C6, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces.
AC210023.4:145357-145376
TGAGAGCATCAACAACAACAACAAAGCCTT145357TTAGTCCCAAGCAAATTGGGGTAGCTAGAGTTGAAACCCAACAGAAACCA
Zea mays cultivar B73 chromosome 2 clone CH201-76C17, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces.
AC210600.4:68119-68138
CCATATTATCAACAACATCAACAAAGCCTT68119TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACCCAACAAGATGT
Zea mays cultivar B73 chromosome 3 clone ZMMBBb-595O4, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces.
AC215998.4:30484-30503
ACCACTCTTACCAACAACAAAGCAAAGCTT30484TTAGTCCCAAGCAAATTGGGATAGGCTGAGAAAATGGCTACTATATTAGC
Setaria viridis cultivar ME034v chromosome 6.
CP050800.1:20132450-20132469
GTCTTGAATCTACAACAACAACATAGCCTT20132450TTAGTCCCAAGCAAATTGGGGCAAGAGCCACAAATCACGGTTCAAGCACA
Zea mays cultivar LT2357 chromosome 1.
CP116739.1:268577405-268577424
ACATGAGAGCATCAACAACAACAAAGCCTT268577405TTAGTCCCAAGCAAATTGGGGTAGCTAGAGTTGAAACCCAACAGAAACCA
Zea mays cultivar LT2357 chromosome 2.
CP116740.1:2758463-2758482
TTAACAGAAATGCAACAAGAAGAAAGCCTA2758463TTAGTCCCAAGCAAATTGGGGTAGACTAGAGTTGAAACCCAACGGAAACC
Zea mays cultivar LT2357 chromosome 5.
CP116743.1:220500172-220500191
AAGCAGTAACAACAACAACAACAGAGTGTT220500172TTAGTCCCAAGCAAATTGGGGCCGGCTAGAGTTGAAATCCAATCGAAACC
Zea mays cultivar LT2357 chromosome 7.
CP116745.1:165511691-165511710
ATGCAAAACCTACTACAACAACAAAGTCGT165511691TTAGTCCCAAGCAAATTGGGACTTGGGGTAGGCAAGAGTAGAAACCCACC
Zea mays cultivar LT2357 chromosome 9.
CP116747.1:29731839-29731858
AACAAAAATCAACAACATCAACATAGCCTT29731839TTAGTCCCAAGCAAATTGGGGTAGGCTAATTGGAAAACAAAAATAAACAG
Aegilops umbellulata cultivar TA1851 chromosome 6U.
CP136059.1:449127776-449127795
ATTAAGAACTAACAAACAACAGCGAAATGT449127776TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGCGAACTGGAAATTAAAAGA
Sorghum bicolor cultivar Hongyingzi chromosome 1.
CP137825.1:84337456-84337475
ACAACAACACAACAACAATAAGAAAGTCTT84337456TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACCCAACATAAACC
Sorghum bicolor cultivar Hongyingzi chromosome 2.
CP137826.1:73844244-73844263
TGGGCTAGAGTCCTTTGGCAACAAAGCCTT73844244TTAGTCCCAAGCAAATTGGGACTTGGGGTAGGCTAGAGTTGAAACCCACC
Sorghum bicolor cultivar Huandiaonuo chromosome 1.
CP137835.1:88336513-88336532
ACAACAACACAACAACAATAAGAAAGTCTT88336513TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACCCAACATAAACC
Sorghum bicolor cultivar Huandiaonuo chromosome 2.
CP137836.1:72011158-72011177
TGGGCTAGAGTCCTTTGGCAACAAAGCCTT72011158TTAGTCCCAAGCAAATTGGGACTTGGGGTAGGCTAGAGTTGAAACCCACC
Paspalum notatum var. saurae isolate R1 chromosome 02.
CP144746.1:12733830-12733849
CGTTGAGAACAATAATGACAACAAAGCCTT12733830TTAGTCCCAAGCAAATTGGGGAAGGCTGATTTCTGCAGTCGTGAAAGAAT
Paspalum notatum var. saurae isolate R1 chromosome 02.
CP144746.1:52346153-52346172
TTAACAACATCAATACAACAACAAAGCCTT52346153TTAGTCCCAAGCAAATTGGGGTAGGATAGAATTAAAACCCAACTAGAGTC
Paspalum notatum var. saurae isolate R1 chromosome 04.
CP144748.1:8854264-8854283
GCATTACACCGCCCCCACCAACAAAGCCTT8854264TTAGTCCCAAGCAAATTGGGGTAGCCTAGAACTGAAACCCAATAAGAGCA
Paspalum notatum var. saurae isolate R1 chromosome 05.
CP144749.1:50074856-50074875
ATACAACAATAATAACAAGAACAAAGCCTT50074856TTAGTCCCAAGCAAATTGGGATAGGCTAGAGTTGAAATCCATTAAGAGCC
Triticum aestivum genome assembly, chromosome: 7B.
LR865779.1:153772938-153772957
ACAACAACAACAACAACAACAACAAAGCCT153772938TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Aegilops longissima genome assembly, chromosome: 7S.
LR881075.1:358240810-358240829
ACAACAACAACAACAACAACAATAAAGCCT358240810TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Zea mays genome assembly, chromosome: 1.
LR897967.1:274026671-274026690
ACATGAGAGCATCAACAACAACAAAGCCTT274026671TTAGTCCCAAGCAAATTGGGGTAGCTAGAGTTGAAACCCAACAGAAACCA
Zea mays genome assembly, chromosome: 2.
LR897968.1:142488069-142488088
CCATATTATCAACAACATCAACAAAGCCTT142488069TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACCCAACAAGATGT
Zea mays genome assembly, chromosome: 5.
LR897971.1:178507555-178507574
AAATGCATCACATCACATCAACATAGCCTT178507555TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACTCAATAAGATGT
Zea mays genome assembly, chromosome: 7.
LR897973.1:170977282-170977301
ATGCAAAACCTACAACAACAACAAAGTCGT170977282TTAGTCCCAAGCAAATTGGGACTTGGGGTAGGCAAGAGTAGAAACCCACC
Zea mays genome assembly, chromosome: 8.
LR897974.1:119246058-119246077
AATCATCAACATTAACATCAACATAGCCTT119246058TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGTTGAAACTTGAAACCCAAC
Digitaria exilis genome assembly, chromosome: 6A.
LR994614.1:2236782-2236801
TATTATGTGGATACAACAATAACATAGCCT2236782TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGATGAAACCCAAGAAACAAA
Digitaria exilis genome assembly, chromosome: 7A.
LR994616.1:30031761-30031780
TAGCTTAAATATATAACAACAAAATAGCCT30031761TTAGTCCCAAGCAAATTGGGGTATGCTAGAGATGAAACCCAAGAAACAAA
Digitaria exilis genome assembly, chromosome: 8A.
LR994618.1:9788124-9788143
CAGCAACAACAGCAACAACAACAATAGTCT9788124TTAGTCCCAAGCAAATTGGGATAGGCTAGAGATGAAAACCAAGAAACCAA
Triticum turgidum subsp. durum genome assembly, chromosome: 7A.
LT934123.1:81415391-81415410
TTTACAACAACAACAACAACAACAAAGCCT81415391TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 6B.
OX082602.1:192437081-192437100
ACAACAACAACAACAACAACAACAAAGCCT192437081TTAGTCCCAAGCAAATTGGGGTAGGTTAGAGGTGAAACTCATAAGATCTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460090.1:96437932-96437951
ATCATAACAACAACAACAACAACAAAGCCT96437932TTAGTCCCAAGCAAATTGGGGTAGGCTATTATGGAATATCATAGTCAGAT
Hordeum vulgare genome assembly, chromosome: 2H.
OX460132.1:89434729-89434748
ATCATAACAACAACAACAACAACAAAGCCT89434729TTAGTCCCAAGCAAATTGGGGTAGGCTATTATGGAATATCATAGTCAGAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590735.1:90956763-90956782
ACAACAACAACAACAACAACAACAAAGCCT90956763TTAGTCCCAAGCAAATTGGGGTAGGCTATTATGGAATATCATAGTCAGAT
Phragmites australis genome assembly, chromosome: 4.
OY282615.1:48795507-48795526
CTTGGTAATCTACAACAACAACAAAGCCTT48795507TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGAGAAACCCAGCAAGATCCA
Phragmites australis genome assembly, chromosome: 11.
OY282622.1:33316860-33316879
ACACTCTGTAACCTAGCTTCCCTCCTGCTT33316860TTAGTCCCAAGCAAATTGGGTAGGTTAGAAATGAAACCCACAAGATCCAA
Phragmites australis genome assembly, chromosome: 13.
OY282624.1:31912734-31912753
CATCATCAACAACAACAACAACAAAGCCTT31912734TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGATGAAACCCAACAAGATCC
Phragmites australis genome assembly, chromosome: 15.
OY282626.1:7765281-7765300
GGGCCATTTGGACAACAACAACAAAACCTT7765281TTAGTCCCAAGCAAATTGGGTTAGGCTAGAGATGAAACCTATAAGATTCA
Phragmites australis genome assembly, chromosome: 16.
OY282627.1:6268864-6268883
AGACAACAACAGAAACAACAACAAAGCCTT6268864TTAGTCCCAAGCAAATTGGGTAGGCTAGAGATGAAAGTCAATAAGAGACA
Phragmites australis genome assembly, chromosome: 21.
OY282632.1:7243779-7243798
AATAACTATCGAATACAGCAACAAAGACTT7243779TTAGTCCCAAGCAAATTGGGGTAGGCTAAACAGGCAAATAACTTAAGAAA
Phragmites australis genome assembly, chromosome: 24.
OY282635.1:7478266-7478285
CTGTGGGACAGTACAACAACAACAAAGCCC7478266TTAGTCCCAAGCAAATTGGGGTAGACCAAAAGAATTTTCCAGTAAGAGTG
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737384.1:175999813-175999832
ACAACAACAACAACAACAACAACAAAGCTT175999813TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATCAGATCTT
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737489.1:142445378-142445397
ACAACAACAACAACAACAACAACAAAGCCT142445378TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATCAGATCTT
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737518.1:163861676-163861695
ACAACAACAACAACAACAACAACAAAGCCT163861676TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATCAGATCTT
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737618.1:170574040-170574059
ACAACAACAACAACAACAACAACAAAGCCT170574040TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATCAGATCTT
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737632.1:166944389-166944408
ACAACAACAACAACAACAACAACAAAGCCT166944389TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATCAGATCTT
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737647.1:132738166-132738185
ACAACAACAACAACAACAACAACAAAGCCT132738166TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATCAGATCTT
Triticum timopheevii genome assembly, chromosome: 1G.
OY997262.1:231988207-231988226
ATTAATCATGCTACAACAACAACAAAGCCT231988207TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Triticum timopheevii genome assembly, chromosome: 2At.
OY997263.1:328051167-328051186
ACAACAACAACAACAACAACAACAAAGCCT328051167TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Triticum timopheevii genome assembly, chromosome: 4At.
OY997267.1:700143287-700143306
CTTACAACAACAACAACAACAACAAAGCCT700143287TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Triticum timopheevii genome assembly, chromosome: 5At.
OY997269.1:488831207-488831226
ATGGTAACAACAACAACAACAACAAAGCCT488831207TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Triticum timopheevii genome assembly, chromosome: 6G.
OY997272.1:235717445-235717464
ACAACAACAACAACAACAACAACAAAGCTT235717445TTAGTCCCAAGCAAATTGGGGTAGGTTAGAGGTGAAACCCATAAGATCTC
Triticum timopheevii genome assembly, chromosome: 6G.
OY997272.1:494525041-494525060
ACAACAACAACAACAACAACATCAAAGCCT494525041TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCGTAAGATCTC
Triticum timopheevii genome assembly, chromosome: 7At.
OY997273.1:475972588-475972607
TTTACAACAACAACAACAACAACAAAGCCT475972588TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Triticum timopheevii genome assembly, chromosome: 7At.
OY997273.1:494368272-494368291
ACAACAACAACAACAACAACAACAAAGCCT494368272TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC
Triticum timopheevii genome assembly, chromosome: 7G.
OY997274.1:673092441-673092460
ATGATATTATCAACAACAACAACAAAGCCT673092441TTAGTCCCAAGCAAATTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTAGTCCCAAGCAAATTGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTAGTCCCAAGCAAATTGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.283 | 0.274 | search_plus_done; http://172.18.8.135:50400/match?q=TTAGTCCCAAGCAAATTGGG&k=0&no_gap=0&offset=0&limit=50
0.347 | 0.064 | search_minus_done; http://172.18.8.135:50400/match?q=CCCAATTTGCTTGGGACTAA&k=0&no_gap=0&offset=0&limit=0
0.347 | 0.000 | cgi_end;

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